EnhancerDB
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  3. rs570324544[chr6:139300339]
Enhancers that have rs570324544[chr6:139300339]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 139289389 139308008 enh39561
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
chr6 139300314 139300341 vista53811
VISTA
Transcript factors that have rs570324544[chr6:139300339]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 139300318 139300339 IRF1 JASPAR yes 70449744
chr6 139300318 139300339 IRF1 JASPAR yes 105758375
chr6 139300319 139300340 IRF1 JASPAR yes 70449746
chr6 139300319 139300340 IRF1 JASPAR yes 105758377
chr6 139300324 139300339 FOXP1 JASPAR yes 70449750
chr6 139300324 139300339 FOXP1 JASPAR yes 105758381
chr6 139300324 139300345 IRF1 JASPAR yes 70449751
chr6 139300324 139300345 IRF1 JASPAR yes 105758382
chr6 139300325 139300346 IRF1 JASPAR yes 70449752
chr6 139300325 139300346 IRF1 JASPAR yes 105758383
chr6 139300326 139300346 RREB1 JASPAR yes 70449754
chr6 139300326 139300346 RREB1 JASPAR yes 105758385
chr6 139300329 139300344 FOXP1 JASPAR yes 70449756
chr6 139300329 139300344 FOXP1 JASPAR yes 105758387
chr6 139300331 139300346 FOXP1 JASPAR yes 70449757
chr6 139300331 139300346 FOXP1 JASPAR yes 105758388
chr6 139300331 139300351 RREB1 JASPAR yes 70449758
chr6 139300331 139300351 RREB1 JASPAR yes 105758389
chr6 139300331 139300352 IRF1 JASPAR yes 70449759
chr6 139300331 139300352 IRF1 JASPAR yes 105758390
chr6 139300332 139300347 FOXP1 JASPAR yes 70449760
chr6 139300332 139300347 FOXP1 JASPAR yes 105758391
chr6 139300332 139300353 IRF1 JASPAR yes 70449761
chr6 139300332 139300353 IRF1 JASPAR yes 105758392
chr6 139300333 139300348 FOXP1 JASPAR yes 70449762
chr6 139300333 139300348 FOXP1 JASPAR yes 105758393
chr6 139300336 139300350 STAT1 JASPAR yes 70449763
chr6 139300336 139300350 STAT1 JASPAR yes 105758394
chr6 139300336 139300351 STAT2 JASPAR yes 70449764
chr6 139300336 139300351 STAT2 JASPAR yes 105758395
Genes associated with rs570324544[chr6:139300339], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More