EnhancerDB
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  3. vista5387[chr1:226997737-226998213]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5387[chr1:226997737-226998213]
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Tissue distribution of vista5387
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Transcription factor that possibly regulate vista5387[chr1:226997737-226998213]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 226997727 226997746 CTCF JASPAR yes 35846548
chr1 226997727 226997746 CTCF JASPAR yes 118472802
chr1 226997751 226997760 NFIX JASPAR yes 35846549
chr1 226997751 226997760 NFIX JASPAR yes 118472803
chr1 226997752 226997758 NFIC JASPAR yes 35846550
chr1 226997752 226997758 NFIC JASPAR yes 118472804
chr1 226997757 226997777 PPARG JASPAR yes 35846551
chr1 226997757 226997777 PPARG JASPAR yes 118472805
chr1 226997768 226997774 NFE2 TRANSFAC yes 35846552
chr1 226997768 226997774 NFE2 TRANSFAC yes 118472806
chr1 226997769 226997780 EBF1 JASPAR yes 35846553
chr1 226997769 226997780 EBF1 JASPAR yes 118472807
chr1 226997807 226997818 NFKB1 JASPAR yes 35846554
chr1 226997807 226997818 NFKB1 JASPAR yes 118472808
chr1 226997863 226997868 ETS2 TRANSFAC yes 35846555
chr1 226997863 226997868 ETS2 TRANSFAC yes 118472809
chr1 226997907 226997915 MEIS2 JASPAR yes 35846556
chr1 226997907 226997915 MEIS3 JASPAR yes 35846557
chr1 226997907 226997915 MEIS2 JASPAR yes 118472810
chr1 226997907 226997915 MEIS3 JASPAR yes 118472811
chr1 226997938 226997953 RFX5 JASPAR yes 35846558
chr1 226997938 226997953 RFX5 JASPAR yes 118472812
chr1 226997947 226997957 TEAD1 JASPAR yes 35846559
chr1 226997947 226997957 TEAD1 JASPAR yes 118472813
chr1 226997957 226997978 IRF1 JASPAR yes 35846560
chr1 226997957 226997978 IRF1 JASPAR yes 118472814
chr1 226997959 226997974 STAT2 JASPAR yes 35846561
chr1 226997959 226997974 STAT2 JASPAR yes 118472815
chr1 226997960 226997974 STAT1 JASPAR yes 35846562
chr1 226997960 226997974 STAT1 JASPAR yes 118472816
chr1 226997961 226997973 IRF1 JASPAR yes 35846563
chr1 226997961 226997973 IRF1 JASPAR yes 118472817
chr1 226997966 226997976 ETV6 JASPAR yes 35846564
chr1 226997966 226997976 ETV6 JASPAR yes 118472818
chr1 226997967 226997974 SPI1 JASPAR yes 35846565
chr1 226997967 226997974 SPI1 JASPAR yes 118472819
chr1 226997967 226997975 EHF JASPAR yes 35846566
chr1 226997967 226997975 EHF JASPAR yes 118472820
chr1 226997976 226997980 ESR1 TRANSFAC yes 35846567
chr1 226997976 226997980 ESR1 TRANSFAC yes 118472821
chr1 226997979 226997983 YY1 TRANSFAC yes 35846568
chr1 226997979 226997983 YY1 TRANSFAC yes 118472822
chr1 226997989 226998003 TLX1 JASPAR yes 35846569
chr1 226997989 226998003 TLX1 JASPAR yes 118472823
chr1 226998012 226998025 NR2F1 JASPAR yes 35846570
chr1 226998012 226998025 NR2F1 JASPAR yes 118472824
chr1 226998016 226998020 ESR1 TRANSFAC yes 35846571
chr1 226998016 226998020 ESR1 TRANSFAC yes 118472825
chr1 226998030 226998036 SOX10 JASPAR yes 35846572
chr1 226998030 226998036 SOX10 JASPAR yes 118472826
chr1 226998044 226998054 SP1 JASPAR yes 35846573
chr1 226998044 226998054 SP1 JASPAR yes 118472827
chr1 226998047 226998052 SP1 TRANSFAC yes 35846574
chr1 226998047 226998052 SP1 TRANSFAC yes 118472828
chr1 226998078 226998088 NFATC3 JASPAR yes 35846575
chr1 226998078 226998088 NFATC3 JASPAR yes 118472829
chr1 226998080 226998087 NFATC2 JASPAR yes 35846576
chr1 226998080 226998087 NFATC2 JASPAR yes 118472830
chr1 226998084 226998098 SPI1 JASPAR yes 35846577
chr1 226998084 226998098 SPIC JASPAR yes 35846578
chr1 226998084 226998098 SPI1 JASPAR yes 118472831
chr1 226998084 226998098 SPIC JASPAR yes 118472832
chr1 226998088 226998093 TFAP2A TRANSFAC yes 35846579
chr1 226998088 226998093 TFAP2A TRANSFAC yes 118472833
chr1 226998088 226998094 MZF1 JASPAR yes 35846580
chr1 226998088 226998094 MZF1 JASPAR yes 118472834
chr1 226998094 226998098 ESR1 TRANSFAC yes 35846581
chr1 226998094 226998098 ESR1 TRANSFAC yes 118472835
chr1 226998097 226998101 YY1 TRANSFAC yes 35846582
chr1 226998097 226998101 YY1 TRANSFAC yes 118472836
chr1 226998100 226998117 BCL6B JASPAR yes 35846583
chr1 226998100 226998117 BCL6B JASPAR yes 118472837
chr1 226998103 226998114 STAT1 JASPAR yes 35846584
chr1 226998103 226998114 STAT3 JASPAR yes 35846585
chr1 226998103 226998114 STAT1 JASPAR yes 118472838
chr1 226998103 226998114 STAT3 JASPAR yes 118472839
chr1 226998104 226998115 CDX2 JASPAR yes 35846586
chr1 226998104 226998115 CDX2 JASPAR yes 118472840
chr1 226998106 226998115 CDX1 JASPAR yes 35846587
chr1 226998106 226998115 CDX1 JASPAR yes 118472841
chr1 226998106 226998116 HOXA13 JASPAR yes 35846588
chr1 226998106 226998116 HOXB13 JASPAR yes 35846589
chr1 226998106 226998116 HOXD13 JASPAR yes 35846590
chr1 226998106 226998116 HOXA13 JASPAR yes 118472842
chr1 226998106 226998116 HOXB13 JASPAR yes 118472843
chr1 226998106 226998116 HOXD13 JASPAR yes 118472844
chr1 226998114 226998124 MZF1 JASPAR yes 35846591
chr1 226998114 226998124 MZF1 JASPAR yes 118472845
chr1 226998117 226998123 SP1 TRANSFAC yes 35846592
chr1 226998117 226998123 SP1 TRANSFAC yes 118472846
chr1 226998128 226998139 NRL JASPAR yes 35846593
chr1 226998128 226998139 NRL JASPAR yes 118472847
chr1 226998136 226998141 H4TF1 TRANSFAC yes 35846594
chr1 226998136 226998141 H4TF1 TRANSFAC yes 118472848
chr1 226998146 226998149 MYB TRANSFAC yes 35846595
chr1 226998146 226998149 MYB TRANSFAC yes 118472849
chr1 226998146 226998157 RUNX1 JASPAR yes 35846596
chr1 226998146 226998157 RUNX1 JASPAR yes 118472850
chr1 226998167 226998177 TEAD1 JASPAR yes 35846597
chr1 226998167 226998177 TEAD4 JASPAR yes 35846598
chr1 226998167 226998177 TEAD1 JASPAR yes 118472851
chr1 226998167 226998177 TEAD4 JASPAR yes 118472852
chr1 226998167 226998179 TEAD1 JASPAR yes 35846599
chr1 226998167 226998179 TEAD1 JASPAR yes 118472853
chr1 226998168 226998176 TEAD3 JASPAR yes 35846600
chr1 226998168 226998176 TEAD3 JASPAR yes 118472854
chr1 226998203 226998218 RFX5 JASPAR yes 35846601
chr1 226998203 226998218 RFX5 JASPAR yes 118472855
chr1 226998211 226998214 MYB TRANSFAC yes 35846602
chr1 226998211 226998214 MYB TRANSFAC yes 118472856
SNP sites on vista5387[chr1:226997737-226998213]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 226997887 rs6426543 A G no 994979
chr1 226997930 rs376430059 C T no 994980
chr1 226998037 rs76594948 G A,C no 994981
chr1 226998050 rs199948611 TG T
SP1
994982
chr1 226998091 rs6426544 G A
MZF1 SPI1 SPIC TFAP2A
994983
chr1 226998096 rs61837760 G A
ESR1 SPI1 SPIC
994984
chr1 226998147 rs184282004 T C
MYB RUNX1
994985
Genes possibly regulated by vista5387[chr1:226997737-226998213]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 226819391 226927024 - ITPKB ENSG00000143772.5 226927024 0.8 0.99 1902 29287
chr1 227057885 227083806 + PSEN2 ENSG00000143801.12 227057885 0.67 1.0 1903 40328
chr1 227085237 227175246 + ADCK3 ENSG00000163050.12 227085237 0.87 1.0 1904 12976
Expression level of Genes
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miRNAs possibly regulated by vista5387[chr1:226997737-226998213]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results