EnhancerDB
  1. Home
  2. SNP
  3. rs199948611[chr1:226998050]
Enhancers that have rs199948611[chr1:226998050]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226990625 227018206 enh975
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 226997737 226998213 vista5387
VISTA
Transcript factors that have rs199948611[chr1:226998050]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226998044 226998054 SP1 JASPAR yes 35846573
chr1 226998044 226998054 SP1 JASPAR yes 118472827
chr1 226998047 226998052 SP1 TRANSFAC yes 35846574
chr1 226998047 226998052 SP1 TRANSFAC yes 118472828
Genes associated with rs199948611[chr1:226998050], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More