EnhancerDB
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  3. rs6426544[chr1:226998091]
Enhancers that have rs6426544[chr1:226998091]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226990625 227018206 enh975
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 226997737 226998213 vista5387
VISTA
Transcript factors that have rs6426544[chr1:226998091]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226998084 226998098 SPI1 JASPAR yes 35846577
chr1 226998084 226998098 SPIC JASPAR yes 35846578
chr1 226998084 226998098 SPI1 JASPAR yes 118472831
chr1 226998084 226998098 SPIC JASPAR yes 118472832
chr1 226998088 226998093 TFAP2A TRANSFAC yes 35846579
chr1 226998088 226998093 TFAP2A TRANSFAC yes 118472833
chr1 226998088 226998094 MZF1 JASPAR yes 35846580
chr1 226998088 226998094 MZF1 JASPAR yes 118472834
Genes associated with rs6426544[chr1:226998091], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More