EnhancerDB
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  3. vista543[chr1:17229862-17230229]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista543[chr1:17229862-17230229]
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Tissue distribution of vista543
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Transcription factor that possibly regulate vista543[chr1:17229862-17230229]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 17229869 17229873 TEAD2 TRANSFAC yes 27063902
chr1 17229869 17229873 TEAD2 TRANSFAC yes 118239811
chr1 17229869 17229874 TBP TRANSFAC yes 27063903
chr1 17229869 17229874 TBP TRANSFAC yes 118239812
chr1 17229869 17229875 TFIID TRANSFAC yes 27063904
chr1 17229869 17229875 TFIID TRANSFAC yes 118239813
chr1 17229879 17229883 YY1 TRANSFAC yes 27063905
chr1 17229879 17229883 YY1 TRANSFAC yes 118239814
chr1 17229909 17229920 PHOX2A JASPAR yes 27063906
chr1 17229909 17229920 PHOX2A JASPAR yes 118239815
chr1 17229910 17229925 JUND JASPAR yes 27063907
chr1 17229910 17229925 JUND JASPAR yes 118239816
chr1 17229911 17229921 SREBF1 JASPAR yes 27063908
chr1 17229911 17229921 SREBF2 JASPAR yes 27063909
chr1 17229911 17229921 SREBF1 JASPAR yes 118239817
chr1 17229911 17229921 SREBF2 JASPAR yes 118239818
chr1 17229925 17229936 DMRT3 JASPAR yes 27063910
chr1 17229925 17229936 DMRT3 JASPAR yes 118239819
chr1 17229931 17229949 MAFF JASPAR yes 27063911
chr1 17229931 17229949 MAFF JASPAR yes 118239820
chr1 17229932 17229936 YY1 TRANSFAC yes 27063912
chr1 17229932 17229936 YY1 TRANSFAC yes 118239821
chr1 17229970 17229976 TCF4 TRANSFAC yes 27063913
chr1 17229970 17229976 TCF4 TRANSFAC yes 118239822
chr1 17229976 17229989 POU2F2 JASPAR yes 27063914
chr1 17229976 17229989 POU2F2 JASPAR yes 118239823
chr1 17229977 17229989 POU3F1 JASPAR yes 27063915
chr1 17229977 17229989 POU3F1 JASPAR yes 118239824
chr1 17229978 17229990 POU2F1 JASPAR yes 27063916
chr1 17229978 17229990 POU2F1 JASPAR yes 118239825
chr1 17229979 17229988 POU3F4 JASPAR yes 27063917
chr1 17229979 17229988 POU3F4 JASPAR yes 118239826
chr1 17229980 17229988 FOXL1 JASPAR yes 27063918
chr1 17229980 17229988 FOXL1 JASPAR yes 118239827
chr1 17229982 17229995 POU2F2 JASPAR yes 27063919
chr1 17229982 17229995 POU2F2 JASPAR yes 118239828
chr1 17229990 17229994 YY1 TRANSFAC yes 27063920
chr1 17229990 17229994 YY1 TRANSFAC yes 118239829
chr1 17230001 17230014 HSF1 JASPAR yes 27063921
chr1 17230001 17230014 HSF1 JASPAR yes 118239830
chr1 17230049 17230063 ONECUT3 JASPAR yes 27063922
chr1 17230049 17230063 ONECUT3 JASPAR yes 118239831
chr1 17230065 17230071 HiNF-A TRANSFAC yes 27063923
chr1 17230065 17230071 HiNF-A TRANSFAC yes 118239832
chr1 17230070 17230085 LEF1 JASPAR yes 27063924
chr1 17230070 17230085 LEF1 JASPAR yes 118239833
chr1 17230080 17230088 FOXO3 JASPAR yes 27063925
chr1 17230080 17230088 FOXO3 JASPAR yes 118239834
chr1 17230080 17230091 FOXA1 JASPAR yes 27063926
chr1 17230080 17230091 FOXA1 JASPAR yes 118239835
chr1 17230084 17230097 ZBTB18 JASPAR yes 27063927
chr1 17230084 17230097 ZBTB18 JASPAR yes 118239836
chr1 17230092 17230100 FOXO3 JASPAR yes 27063928
chr1 17230092 17230100 FOXO3 JASPAR yes 118239837
chr1 17230098 17230103 MYC TRANSFAC yes 27063929
chr1 17230098 17230103 MYC TRANSFAC yes 118239838
chr1 17230099 17230120 MAFG JASPAR yes 27063930
chr1 17230099 17230120 MAFG JASPAR yes 118239839
chr1 17230148 17230153 GATA2 JASPAR yes 27063931
chr1 17230148 17230153 GATA2 JASPAR yes 118239840
chr1 17230161 17230167 SOX10 JASPAR yes 27063932
chr1 17230161 17230167 SOX10 JASPAR yes 118239841
chr1 17230185 17230189 YY1 TRANSFAC yes 27063933
chr1 17230185 17230189 YY1 TRANSFAC yes 118239842
chr1 17230190 17230194 YY1 TRANSFAC yes 27063934
chr1 17230190 17230194 YY1 TRANSFAC yes 118239843
chr1 17230201 17230216 HNF1A JASPAR yes 27063935
chr1 17230201 17230216 HNF1A JASPAR yes 118239844
chr1 17230202 17230215 HNF1B JASPAR yes 27063936
chr1 17230202 17230215 HNF1B JASPAR yes 118239845
chr1 17230202 17230216 POU4F1 JASPAR yes 27063937
chr1 17230202 17230216 POU4F1 JASPAR yes 118239846
chr1 17230202 17230218 POU4F2 JASPAR yes 27063938
chr1 17230202 17230218 POU4F3 JASPAR yes 27063939
chr1 17230202 17230218 POU4F2 JASPAR yes 118239847
chr1 17230202 17230218 POU4F3 JASPAR yes 118239848
chr1 17230214 17230226 TEF JASPAR yes 27063940
chr1 17230214 17230226 TEF JASPAR yes 118239849
chr1 17230217 17230225 FOXL1 JASPAR yes 27063941
chr1 17230217 17230225 FOXL1 JASPAR yes 118239850
chr1 17230221 17230225 YY1 TRANSFAC yes 27063942
chr1 17230221 17230225 YY1 TRANSFAC yes 118239851
chr1 17230227 17230236 SOX9 JASPAR yes 27063943
chr1 17230227 17230236 SOX9 JASPAR yes 118239852
chr1 17230229 17230238 SRY JASPAR yes 27063944
chr1 17230229 17230238 SRY JASPAR yes 118239853
SNP sites on vista543[chr1:17229862-17230229]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 17229978 rs564613844 G A
POU2F1 POU2F2 POU3F1
114595
chr1 17229991 rs10888030 C T
POU2F2 YY1
114596
chr1 17230019 rs537345162 G GA,GAA,GAAA no 114597
chr1 17230034 rs540702110 G T no 114598
chr1 17230169 rs549652346 A C no 114599
Genes possibly regulated by vista543[chr1:17229862-17230229]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 17300997 17307330 - MFAP2 ENSG00000117122.9 17307330 0.89 1.0 238 22899
Expression level of Genes
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miRNAs possibly regulated by vista543[chr1:17229862-17230229]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results