EnhancerDB
  1. Home
  2. SNP
  3. rs10888030[chr1:17229991]
Enhancers that have rs10888030[chr1:17229991]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
chr1 17229862 17230229 vista543
VISTA
Transcript factors that have rs10888030[chr1:17229991]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17228555 17230938 TCF7L2 GTRD no Colon (HCT116) 107802243
chr1 17229982 17229995 POU2F2 JASPAR yes 27063919
chr1 17229982 17229995 POU2F2 JASPAR yes 118239828
chr1 17229990 17229994 YY1 TRANSFAC yes 27063920
chr1 17229990 17229994 YY1 TRANSFAC yes 118239829
Genes associated with rs10888030[chr1:17229991], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More