EnhancerDB
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  3. rs564613844[chr1:17229978]
Enhancers that have rs564613844[chr1:17229978]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
chr1 17229862 17230229 vista543
VISTA
Transcript factors that have rs564613844[chr1:17229978]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17228555 17230938 TCF7L2 GTRD no Colon (HCT116) 107802243
chr1 17229976 17229989 POU2F2 JASPAR yes 27063914
chr1 17229976 17229989 POU2F2 JASPAR yes 118239823
chr1 17229977 17229989 POU3F1 JASPAR yes 27063915
chr1 17229977 17229989 POU3F1 JASPAR yes 118239824
chr1 17229978 17229990 POU2F1 JASPAR yes 27063916
chr1 17229978 17229990 POU2F1 JASPAR yes 118239825
Genes associated with rs564613844[chr1:17229978], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More