EnhancerDB
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  3. vista5487[chr1:230220164-230220401]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5487[chr1:230220164-230220401]
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Tissue distribution of vista5487
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Transcription factor that possibly regulate vista5487[chr1:230220164-230220401]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 230220271 230220727 JUND UCSC Txn Factor no Conserved 107878379
chr1 230220271 230220727 JUND UCSC Txn Factor no Conserved 107878380
chr1 230220343 230220693 FOSL2 UCSC Txn Factor no Conserved 107878402
chr1 230220343 230220693 FOSL2 UCSC Txn Factor no Conserved 107878403
chr1 230220358 230220638 FOS UCSC Txn Factor no Conserved 107878418
chr1 230220358 230220638 FOS UCSC Txn Factor no Conserved 107878419
chr1 230220361 230220732 EP300 UCSC Txn Factor no Conserved 107878420
chr1 230220361 230220732 EP300 UCSC Txn Factor no Conserved 107878421
chr1 230220365 230220714 STAT3 UCSC Txn Factor no Conserved 107878424
chr1 230220365 230220714 STAT3 UCSC Txn Factor no Conserved 107878425
chr1 230220367 230220681 TCF12 UCSC Txn Factor no Conserved 107878428
chr1 230220367 230220681 TCF12 UCSC Txn Factor no Conserved 107878429
chr1 230220155 230220175 ESR1 JASPAR yes 36019697
chr1 230220155 230220175 TP63 JASPAR yes 36019698
chr1 230220155 230220175 ESR1 JASPAR yes 118477345
chr1 230220155 230220175 TP63 JASPAR yes 118477346
chr1 230220167 230220177 NFIA JASPAR yes 36019699
chr1 230220167 230220177 NFIA JASPAR yes 118477347
chr1 230220168 230220177 NFIX JASPAR yes 36019700
chr1 230220168 230220177 NFIX JASPAR yes 118477348
chr1 230220168 230220188 TP53 JASPAR yes 36019701
chr1 230220168 230220188 TP53 JASPAR yes 118477349
chr1 230220169 230220175 NFIC JASPAR yes 36019702
chr1 230220169 230220175 NFIC JASPAR yes 118477350
chr1 230220170 230220190 TP63 JASPAR yes 36019703
chr1 230220170 230220190 TP63 JASPAR yes 118477351
chr1 230220171 230220189 TP53 JASPAR yes 36019704
chr1 230220171 230220189 TP73 JASPAR yes 36019705
chr1 230220171 230220189 TP53 JASPAR yes 118477352
chr1 230220171 230220189 TP73 JASPAR yes 118477353
chr1 230220173 230220188 TP53 JASPAR yes 36019706
chr1 230220173 230220188 TP53 JASPAR yes 118477354
chr1 230220179 230220200 ZNF263 JASPAR yes 36019707
chr1 230220179 230220200 ZNF263 JASPAR yes 118477355
chr1 230220180 230220184 LFA1 TRANSFAC yes 36019708
chr1 230220180 230220184 LFA1 TRANSFAC yes 118477356
chr1 230220191 230220212 ZNF263 JASPAR yes 36019709
chr1 230220191 230220212 ZNF263 JASPAR yes 118477357
chr1 230220192 230220199 CEBPA TRANSFAC yes 36019710
chr1 230220192 230220199 CEBPA TRANSFAC yes 118477358
chr1 230220197 230220201 LFA1 TRANSFAC yes 36019711
chr1 230220197 230220201 LFA1 TRANSFAC yes 118477359
chr1 230220214 230220229 JUND JASPAR yes 36019712
chr1 230220214 230220229 JUND JASPAR yes 118477360
chr1 230220219 230220227 CREB1 JASPAR yes 36019713
chr1 230220219 230220227 CREB1 JASPAR yes 118477361
chr1 230220221 230220236 ESR2 JASPAR yes 36019714
chr1 230220221 230220236 ESR2 JASPAR yes 118477362
chr1 230220222 230220226 ESR1 TRANSFAC yes 36019715
chr1 230220222 230220226 ESR1 TRANSFAC yes 118477363
chr1 230220251 230220255 YY1 TRANSFAC yes 36019716
chr1 230220251 230220255 YY1 TRANSFAC yes 118477364
chr1 230220279 230220290 ELK4 JASPAR yes 36019717
chr1 230220279 230220290 FLI1 JASPAR yes 36019718
chr1 230220279 230220290 ELK4 JASPAR yes 118477365
chr1 230220279 230220290 FLI1 JASPAR yes 118477366
chr1 230220280 230220290 ELK1 JASPAR yes 36019719
chr1 230220280 230220290 ELK3 JASPAR yes 36019720
chr1 230220280 230220290 ERF JASPAR yes 36019721
chr1 230220280 230220290 ERG JASPAR yes 36019722
chr1 230220280 230220290 ETS1 JASPAR yes 36019723
chr1 230220280 230220290 ETV1 JASPAR yes 36019724
chr1 230220280 230220290 ETV3 JASPAR yes 36019725
chr1 230220280 230220290 ETV4 JASPAR yes 36019726
chr1 230220280 230220290 ETV6 JASPAR yes 36019727
chr1 230220280 230220290 FEV JASPAR yes 36019728
chr1 230220280 230220290 FLI1 JASPAR yes 36019729
chr1 230220280 230220290 GABPA JASPAR yes 36019730
chr1 230220280 230220290 ELK1 JASPAR yes 118477367
chr1 230220280 230220290 ELK3 JASPAR yes 118477368
chr1 230220280 230220290 ERF JASPAR yes 118477369
chr1 230220280 230220290 ERG JASPAR yes 118477370
chr1 230220280 230220290 ETS1 JASPAR yes 118477371
chr1 230220280 230220290 ETV1 JASPAR yes 118477372
chr1 230220280 230220290 ETV3 JASPAR yes 118477373
chr1 230220280 230220290 ETV4 JASPAR yes 118477374
chr1 230220280 230220290 ETV6 JASPAR yes 118477375
chr1 230220280 230220290 FEV JASPAR yes 118477376
chr1 230220280 230220290 FLI1 JASPAR yes 118477377
chr1 230220280 230220290 GABPA JASPAR yes 118477378
chr1 230220280 230220291 ETV2 JASPAR yes 36019731
chr1 230220280 230220291 ETV2 JASPAR yes 118477379
chr1 230220280 230220292 ELF1 JASPAR yes 36019732
chr1 230220280 230220292 ELF4 JASPAR yes 36019733
chr1 230220280 230220292 ELF1 JASPAR yes 118477380
chr1 230220280 230220292 ELF4 JASPAR yes 118477381
chr1 230220280 230220293 ELF1 JASPAR yes 36019734
chr1 230220280 230220293 ELF1 JASPAR yes 118477382
chr1 230220280 230220294 SPIC JASPAR yes 36019735
chr1 230220280 230220294 SPIC JASPAR yes 118477383
chr1 230220281 230220288 SPI1 JASPAR yes 36019736
chr1 230220281 230220288 SPI1 JASPAR yes 118477384
chr1 230220281 230220289 EHF JASPAR yes 36019737
chr1 230220281 230220289 FEV JASPAR yes 36019738
chr1 230220281 230220289 EHF JASPAR yes 118477385
chr1 230220281 230220289 FEV JASPAR yes 118477386
chr1 230220341 230220346 SP1 TRANSFAC yes 36019739
chr1 230220341 230220346 SP1 TRANSFAC yes 118477387
chr1 230220341 230220355 PLAG1 JASPAR yes 36019740
chr1 230220341 230220355 PLAG1 JASPAR yes 118477388
chr1 230220358 230220372 TLX1 JASPAR yes 36019741
chr1 230220358 230220372 TLX1 JASPAR yes 118477389
chr1 230220359 230220373 TLX1 JASPAR yes 36019742
chr1 230220359 230220373 TLX1 JASPAR yes 118477390
chr1 230220360 230220373 SMAD2 JASPAR yes 36019743
chr1 230220360 230220373 SMAD2 JASPAR yes 118477391
chr1 230220372 230220388 GLIS1 JASPAR yes 36019744
chr1 230220372 230220388 GLIS1 JASPAR yes 118477392
chr1 230220373 230220387 GLIS3 JASPAR yes 36019745
chr1 230220373 230220387 GLIS3 JASPAR yes 118477393
chr1 230220382 230220395 SMAD2 JASPAR yes 36019746
chr1 230220382 230220395 SMAD2 JASPAR yes 118477394
chr1 230220387 230220397 MAX JASPAR yes 36019747
chr1 230220387 230220397 MAX JASPAR yes 118477395
chr1 230220387 230220398 USF2 JASPAR yes 36019748
chr1 230220387 230220398 USF2 JASPAR yes 118477396
chr1 230220393 230220413 PPARG JASPAR yes 36019749
chr1 230220393 230220413 PPARG JASPAR yes 118477397
chr1 230220400 230220410 SP1 JASPAR yes 36019750
chr1 230220400 230220410 SP1 JASPAR yes 118477398
SNP sites on vista5487[chr1:230220164-230220401]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 230220188 rs59905327 CAA C
TP53 TP63 TP73 ZNF263
1014548
chr1 230220191 rs60849080 A C
ZNF263
1014549
chr1 230220288 rs147050909 T A
EHF ELF1 ELF4 ELK1 ELK3 ELK4 ERF ERG ETS1 ETV1 ETV2 ETV3 ETV4 ETV6 FEV FLI1 GABPA JUND SPI1 SPIC
1014550
chr1 230220311 rs16850873 G A
JUND
1014551
chr1 230220347 rs542116979 G C
FOSL2 JUND PLAG1
1014552
Genes possibly regulated by vista5487[chr1:230220164-230220401]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 230193536 230417870 + GALNT2 ENSG00000143641.8 230193536 0.77 0.99 1937 73372
Expression level of Genes
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miRNAs possibly regulated by vista5487[chr1:230220164-230220401]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results