EnhancerDB
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  3. rs59905327[chr1:230220188]
Enhancers that have rs59905327[chr1:230220188]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230203175 230225395 enh12769
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr1 230220164 230220401 vista5487
VISTA
Transcript factors that have rs59905327[chr1:230220188]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230220083 230220733 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21391242
chr1 230220083 230220733 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878355
chr1 230220083 230220733 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878356
chr1 230220089 230220525 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107878357
chr1 230220089 230220525 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107878358
chr1 230220125 230220785 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21391243
chr1 230220125 230220785 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878359
chr1 230220125 230220785 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878360
chr1 230220133 230220517 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107878361
chr1 230220133 230220517 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107878362
chr1 230220168 230220188 TP53 JASPAR yes 36019701
chr1 230220168 230220188 TP53 JASPAR yes 118477349
chr1 230220170 230220190 TP63 JASPAR yes 36019703
chr1 230220170 230220190 TP63 JASPAR yes 118477351
chr1 230220171 230220189 TP53 JASPAR yes 36019704
chr1 230220171 230220189 TP73 JASPAR yes 36019705
chr1 230220171 230220189 TP53 JASPAR yes 118477352
chr1 230220171 230220189 TP73 JASPAR yes 118477353
chr1 230220173 230220188 TP53 JASPAR yes 36019706
chr1 230220173 230220188 TP53 JASPAR yes 118477354
chr1 230220179 230220200 ZNF263 JASPAR yes 36019707
chr1 230220179 230220200 ZNF263 JASPAR yes 118477355
chr1 230220184 230220840 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107878363
chr1 230220184 230220840 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107878364
chr1 230220188 230220764 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107878365
chr1 230220188 230220764 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107878366
Genes associated with rs59905327[chr1:230220188], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More