EnhancerDB
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  3. vista599[chr1:19278388-19278892]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista599[chr1:19278388-19278892]
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Tissue distribution of vista599
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Transcription factor that possibly regulate vista599[chr1:19278388-19278892]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 19278405 19278425 PPARG JASPAR yes 27165434
chr1 19278405 19278425 PPARG JASPAR yes 118242772
chr1 19278416 19278430 RORA JASPAR yes 27165435
chr1 19278416 19278430 RORA JASPAR yes 118242773
chr1 19278486 19278505 REST JASPAR yes 27165436
chr1 19278486 19278505 REST JASPAR yes 118242774
chr1 19278487 19278501 PLAG1 JASPAR yes 27165437
chr1 19278487 19278501 PLAG1 JASPAR yes 118242775
chr1 19278499 19278503 LFA1 TRANSFAC yes 27165438
chr1 19278499 19278503 LFA1 TRANSFAC yes 118242776
chr1 19278505 19278522 RARA JASPAR yes 27165439
chr1 19278505 19278522 RARA JASPAR yes 118242777
chr1 19278507 19278522 HNF4G JASPAR yes 27165440
chr1 19278507 19278522 HNF4G JASPAR yes 118242778
chr1 19278508 19278523 HNF4A JASPAR yes 27165441
chr1 19278508 19278523 HNF4A JASPAR yes 118242779
chr1 19278513 19278526 NR2F1 JASPAR yes 27165442
chr1 19278513 19278526 NR2F1 JASPAR yes 118242780
chr1 19278515 19278523 NR4A2 JASPAR yes 27165443
chr1 19278515 19278523 NR4A2 JASPAR yes 118242781
chr1 19278516 19278531 ESR2 JASPAR yes 27165444
chr1 19278516 19278531 ESR2 JASPAR yes 118242782
chr1 19278517 19278521 ESR1 TRANSFAC yes 27165445
chr1 19278517 19278521 ESR1 TRANSFAC yes 118242783
chr1 19278544 19278559 HNF4A JASPAR yes 27165446
chr1 19278544 19278559 HNF4A JASPAR yes 118242784
chr1 19278567 19278576 NFIX JASPAR yes 27165447
chr1 19278567 19278576 NFIX JASPAR yes 118242785
chr1 19278567 19278577 NFIA JASPAR yes 27165448
chr1 19278567 19278577 NFIA JASPAR yes 118242786
chr1 19278568 19278577 HIC2 JASPAR yes 27165449
chr1 19278568 19278577 HIC2 JASPAR yes 118242787
chr1 19278569 19278575 NFIC JASPAR yes 27165450
chr1 19278569 19278575 NFIC JASPAR yes 118242788
chr1 19278602 19278610 GATA3 JASPAR yes 27165451
chr1 19278602 19278610 GATA3 JASPAR yes 118242789
chr1 19278615 19278625 NFKB1 JASPAR yes 27165452
chr1 19278615 19278625 NFKB1 JASPAR yes 118242790
chr1 19278615 19278626 NFKB1 JASPAR yes 27165453
chr1 19278615 19278626 NFKB1 JASPAR yes 118242791
chr1 19278616 19278626 RELA JASPAR yes 27165454
chr1 19278616 19278626 REL JASPAR yes 27165455
chr1 19278616 19278626 RELA JASPAR yes 118242792
chr1 19278616 19278626 REL JASPAR yes 118242793
chr1 19278626 19278637 NFKB1 JASPAR yes 27165456
chr1 19278626 19278637 NFKB1 JASPAR yes 118242794
chr1 19278627 19278637 REL JASPAR yes 27165457
chr1 19278627 19278637 REL JASPAR yes 118242795
chr1 19278627 19278638 NFKB1 JASPAR yes 27165458
chr1 19278627 19278638 NFKB1 JASPAR yes 118242796
chr1 19278628 19278638 REL JASPAR yes 27165459
chr1 19278628 19278638 REL JASPAR yes 118242797
chr1 19278643 19278649 TCF4 TRANSFAC yes 27165460
chr1 19278643 19278649 TCF4 TRANSFAC yes 118242798
chr1 19278643 19278654 NFE2L2 JASPAR yes 27165461
chr1 19278643 19278654 NFE2L2 JASPAR yes 118242799
chr1 19278661 19278665 YY1 TRANSFAC yes 27165462
chr1 19278661 19278665 YY1 TRANSFAC yes 118242800
chr1 19278668 19278682 PLAG1 JASPAR yes 27165463
chr1 19278668 19278682 PLAG1 JASPAR yes 118242801
chr1 19278692 19278707 FOXA1 JASPAR yes 27165464
chr1 19278692 19278707 FOXA1 JASPAR yes 118242802
chr1 19278693 19278705 FOXI1 JASPAR yes 27165465
chr1 19278693 19278705 FOXI1 JASPAR yes 118242803
chr1 19278696 19278707 FOXA1 JASPAR yes 27165466
chr1 19278696 19278707 FOXA1 JASPAR yes 118242804
chr1 19278696 19278717 IRF1 JASPAR yes 27165467
chr1 19278696 19278717 IRF1 JASPAR yes 118242805
chr1 19278697 19278712 RUNX2 JASPAR yes 27165468
chr1 19278697 19278712 RUNX2 JASPAR yes 118242806
chr1 19278698 19278713 STAT2 JASPAR yes 27165469
chr1 19278698 19278713 STAT2 JASPAR yes 118242807
chr1 19278699 19278713 STAT1 JASPAR yes 27165470
chr1 19278699 19278713 STAT1 JASPAR yes 118242808
chr1 19278700 19278712 IRF1 JASPAR yes 27165471
chr1 19278700 19278712 IRF1 JASPAR yes 118242809
chr1 19278700 19278714 IRF7 JASPAR yes 27165472
chr1 19278700 19278714 IRF7 JASPAR yes 118242810
chr1 19278700 19278715 IRF9 JASPAR yes 27165473
chr1 19278700 19278715 IRF9 JASPAR yes 118242811
chr1 19278706 19278722 RFX2 JASPAR yes 27165474
chr1 19278706 19278722 RFX3 JASPAR yes 27165475
chr1 19278706 19278722 RFX5 JASPAR yes 27165476
chr1 19278706 19278722 RFX2 JASPAR yes 118242812
chr1 19278706 19278722 RFX3 JASPAR yes 118242813
chr1 19278706 19278722 RFX5 JASPAR yes 118242814
chr1 19278751 19278763 ZBTB7A JASPAR yes 27165477
chr1 19278751 19278763 ZBTB7A JASPAR yes 118242815
chr1 19278752 19278764 GLI2 JASPAR yes 27165478
chr1 19278752 19278764 GLI2 JASPAR yes 118242816
chr1 19278759 19278763 YY1 TRANSFAC yes 27165479
chr1 19278759 19278763 YY1 TRANSFAC yes 118242817
chr1 19278764 19278774 MAX JASPAR yes 27165480
chr1 19278764 19278774 MNT JASPAR yes 27165481
chr1 19278764 19278774 MAX JASPAR yes 118242818
chr1 19278764 19278774 MNT JASPAR yes 118242819
chr1 19278765 19278772 USF1 JASPAR yes 27165482
chr1 19278765 19278772 USF1 JASPAR yes 118242820
chr1 19278765 19278775 MAX JASPAR yes 27165483
chr1 19278765 19278775 MAX JASPAR yes 118242821
chr1 19278766 19278771 MYC TRANSFAC yes 27165484
chr1 19278766 19278771 USF1 TRANSFAC yes 27165485
chr1 19278766 19278771 USF2 TRANSFAC yes 27165486
chr1 19278766 19278771 MYC TRANSFAC yes 118242822
chr1 19278766 19278771 USF1 TRANSFAC yes 118242823
chr1 19278766 19278771 USF2 TRANSFAC yes 118242824
chr1 19278766 19278773 USF1 JASPAR yes 27165487
chr1 19278766 19278773 USF1 JASPAR yes 118242825
chr1 19278794 19278808 STAT1 JASPAR yes 27165488
chr1 19278794 19278808 STAT1 JASPAR yes 118242826
chr1 19278794 19278812 IRF2 JASPAR yes 27165489
chr1 19278794 19278812 IRF2 JASPAR yes 118242827
chr1 19278795 19278807 IRF1 JASPAR yes 27165490
chr1 19278795 19278807 IRF1 JASPAR yes 118242828
chr1 19278817 19278822 SP1 TRANSFAC yes 27165491
chr1 19278817 19278822 SP1 TRANSFAC yes 118242829
chr1 19278839 19278854 TFAP2A JASPAR yes 27165492
chr1 19278839 19278854 TFAP2C JASPAR yes 27165493
chr1 19278839 19278854 TFAP2A JASPAR yes 118242830
chr1 19278839 19278854 TFAP2C JASPAR yes 118242831
chr1 19278848 19278868 RREB1 JASPAR yes 27165494
chr1 19278848 19278868 RREB1 JASPAR yes 118242832
chr1 19278865 19278873 FOXO3 JASPAR yes 27165495
chr1 19278865 19278873 FOXO3 JASPAR yes 118242833
SNP sites on vista599[chr1:19278388-19278892]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 19278635 rs28452849 C T
NFKB1 REL
128426
chr1 19278705 rs540268063 T C
FOXA1 FOXI1 IRF1 IRF7 IRF9 RUNX2 STAT1 STAT2
128427
Genes possibly regulated by vista599[chr1:19278388-19278892]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 19166093 19186176 - TAS1R2 ENSG00000179002.5 19186176 0.94 1.0 252 7788
chr1 19175767 19247615 - RP13-279N23.2 ENSG00000255275.3 19247615 0.98 0.94 253 69227
chr1 19197926 19229275 - ALDH4A1 ENSG00000159423.12 19229275 0.95 0.98 254 50887
chr1 19230775 19283180 - IFFO2 ENSG00000169991.6 19283180 0.83 0.99 255 95712
Expression level of Genes
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miRNAs possibly regulated by vista599[chr1:19278388-19278892]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results