EnhancerDB
  1. Home
  2. Enhancers
  3. vista615[chr1:19780234-19780551]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista615[chr1:19780234-19780551]
Back to top
Tissue distribution of vista615
Back to top
Transcription factor that possibly regulate vista615[chr1:19780234-19780551]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 19780229 19780234 SP1 TRANSFAC yes 27192524
chr1 19780229 19780234 SP1 TRANSFAC yes 118243438
chr1 19780248 19780254 SOX10 JASPAR yes 27192525
chr1 19780248 19780254 SOX10 JASPAR yes 118243439
chr1 19780270 19780286 POU4F2 JASPAR yes 27192526
chr1 19780270 19780286 POU4F2 JASPAR yes 118243440
chr1 19780273 19780291 MAFF JASPAR yes 27192527
chr1 19780273 19780291 MAFF JASPAR yes 118243441
chr1 19780275 19780279 YY1 TRANSFAC yes 27192528
chr1 19780275 19780279 YY1 TRANSFAC yes 118243442
chr1 19780275 19780290 MAFK JASPAR yes 27192529
chr1 19780275 19780290 MAFK JASPAR yes 118243443
chr1 19780285 19780291 ZNF354C JASPAR yes 27192530
chr1 19780285 19780291 ZNF354C JASPAR yes 118243444
chr1 19780310 19780319 SRY JASPAR yes 27192531
chr1 19780310 19780319 SRY JASPAR yes 118243445
chr1 19780316 19780324 HOXA5 JASPAR yes 27192532
chr1 19780316 19780324 HOXA5 JASPAR yes 118243446
chr1 19780327 19780341 GLIS2 JASPAR yes 27192533
chr1 19780327 19780341 GLIS2 JASPAR yes 118243447
chr1 19780328 19780342 GLIS3 JASPAR yes 27192534
chr1 19780328 19780342 GLIS3 JASPAR yes 118243448
chr1 19780329 19780341 INSM1 JASPAR yes 27192535
chr1 19780329 19780341 INSM1 JASPAR yes 118243449
chr1 19780349 19780361 POU3F1 JASPAR yes 27192536
chr1 19780349 19780361 POU3F1 JASPAR yes 118243450
chr1 19780356 19780360 YY1 TRANSFAC yes 27192537
chr1 19780356 19780360 YY1 TRANSFAC yes 118243451
chr1 19780365 19780369 YY1 TRANSFAC yes 27192538
chr1 19780365 19780369 YY1 TRANSFAC yes 118243452
chr1 19780368 19780371 MYB TRANSFAC yes 27192539
chr1 19780368 19780371 MYB TRANSFAC yes 118243453
chr1 19780394 19780406 YY1 JASPAR yes 27192540
chr1 19780394 19780406 YY1 JASPAR yes 118243454
chr1 19780399 19780403 YY1 TRANSFAC yes 27192541
chr1 19780399 19780403 YY1 TRANSFAC yes 118243455
chr1 19780406 19780420 POU1F1 JASPAR yes 27192542
chr1 19780406 19780420 POU1F1 JASPAR yes 118243456
chr1 19780407 19780420 POU2F2 JASPAR yes 27192543
chr1 19780407 19780420 POU2F2 JASPAR yes 118243457
chr1 19780412 19780426 SPI1 JASPAR yes 27192544
chr1 19780412 19780426 SPI1 JASPAR yes 118243458
chr1 19780422 19780428 SOX10 JASPAR yes 27192545
chr1 19780422 19780428 SOX10 JASPAR yes 118243459
chr1 19780434 19780452 ESR1 JASPAR yes 27192546
chr1 19780434 19780452 ESR1 JASPAR yes 118243460
chr1 19780440 19780445 SP1 TRANSFAC yes 27192547
chr1 19780440 19780445 SP1 TRANSFAC yes 118243461
chr1 19780457 19780462 SP1 TRANSFAC yes 27192548
chr1 19780457 19780462 SP1 TRANSFAC yes 118243462
chr1 19780470 19780491 MAFG JASPAR yes 27192549
chr1 19780470 19780491 MAFG JASPAR yes 118243463
chr1 19780475 19780493 MAFF JASPAR yes 27192550
chr1 19780475 19780493 MAFF JASPAR yes 118243464
chr1 19780501 19780509 ISL2 JASPAR yes 27192551
chr1 19780501 19780509 ISL2 JASPAR yes 118243465
chr1 19780508 19780527 CTCF JASPAR yes 27192552
chr1 19780508 19780527 CTCF JASPAR yes 118243466
SNP sites on vista615[chr1:19780234-19780551]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 19780245 rs190356468 G C no 131946
chr1 19780411 rs71008170 T TGAA
POU1F1 POU2F2
131947
chr1 19780450 rs541045969 T C
ESR1
131948
chr1 19780481 rs555164743 G A
MAFF MAFG
131949
chr1 19780509 rs3913439 C T
CTCF ISL2
131950
chr1 19780510 rs3850532 G A
CTCF
131951
Genes possibly regulated by vista615[chr1:19780234-19780551]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 19665267 19812066 - CAPZB ENSG00000077549.13 19812066 0.66 0.99 262 68485
Expression level of Genes
Back to top
miRNAs possibly regulated by vista615[chr1:19780234-19780551]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results