EnhancerDB
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  3. rs71008170[chr1:19780411]
Enhancers that have rs71008170[chr1:19780411]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 19780234 19780551 vista615
VISTA
Transcript factors that have rs71008170[chr1:19780411]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19780326 19780782 ZNF143 GTRD no Epithelial (MCF-7) 107802304
chr1 19780406 19780420 POU1F1 JASPAR yes 27192542
chr1 19780406 19780420 POU1F1 JASPAR yes 118243456
chr1 19780407 19780420 POU2F2 JASPAR yes 27192543
chr1 19780407 19780420 POU2F2 JASPAR yes 118243457
Genes associated with rs71008170[chr1:19780411], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More