EnhancerDB
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  3. rs3850532[chr1:19780510]
Enhancers that have rs3850532[chr1:19780510]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 19780234 19780551 vista615
VISTA
Transcript factors that have rs3850532[chr1:19780510]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19780326 19780782 ZNF143 GTRD no Epithelial (MCF-7) 107802304
chr1 19780508 19780527 CTCF JASPAR yes 27192552
chr1 19780508 19780527 CTCF JASPAR yes 118243466
Genes associated with rs3850532[chr1:19780510], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More