EnhancerDB
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  3. vista62[chr1:2162325-2162996]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista62[chr1:2162325-2162996]
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Tissue distribution of vista62
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Transcription factor that possibly regulate vista62[chr1:2162325-2162996]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 2162332 2162337 TFAP2A TRANSFAC yes 26224521
chr1 2162332 2162337 TFAP2A TRANSFAC yes 118216031
chr1 2162332 2162338 MZF1 JASPAR yes 26224522
chr1 2162332 2162338 MZF1 JASPAR yes 118216032
chr1 2162332 2162353 ZNF263 JASPAR yes 26224523
chr1 2162332 2162353 ZNF263 JASPAR yes 118216033
chr1 2162335 2162345 SP1 JASPAR yes 26224524
chr1 2162335 2162345 SP1 JASPAR yes 118216034
chr1 2162335 2162356 ZNF263 JASPAR yes 26224525
chr1 2162335 2162356 ZNF263 JASPAR yes 118216035
chr1 2162336 2162343 CEBPA TRANSFAC yes 26224526
chr1 2162336 2162343 CEBPA TRANSFAC yes 118216036
chr1 2162347 2162353 ZNF354C JASPAR yes 26224527
chr1 2162347 2162353 ZNF354C JASPAR yes 118216037
chr1 2162365 2162369 NFE TRANSFAC yes 26224528
chr1 2162365 2162369 NFE TRANSFAC yes 118216038
chr1 2162409 2162429 TP63 JASPAR yes 26224529
chr1 2162409 2162429 TP63 JASPAR yes 118216039
chr1 2162417 2162429 FOXI1 JASPAR yes 26224530
chr1 2162417 2162429 FOXI1 JASPAR yes 118216040
chr1 2162462 2162475 SMAD2 JASPAR yes 26224531
chr1 2162462 2162475 SMAD2 JASPAR yes 118216041
chr1 2162485 2162495 SP1 JASPAR yes 26224532
chr1 2162485 2162495 SP1 JASPAR yes 118216042
chr1 2162491 2162496 TFAP2A TRANSFAC yes 26224533
chr1 2162491 2162496 TFAP2A TRANSFAC yes 118216043
chr1 2162491 2162497 MZF1 JASPAR yes 26224534
chr1 2162491 2162497 MZF1 JASPAR yes 118216044
chr1 2162493 2162498 ETS2 TRANSFAC yes 26224535
chr1 2162493 2162498 ETS2 TRANSFAC yes 118216045
chr1 2162537 2162542 SP1 TRANSFAC yes 26224536
chr1 2162537 2162542 SP1 TRANSFAC yes 118216046
chr1 2162557 2162577 RREB1 JASPAR yes 26224537
chr1 2162557 2162577 RREB1 JASPAR yes 118216047
chr1 2162570 2162575 SP1 TRANSFAC yes 26224538
chr1 2162570 2162575 SP1 TRANSFAC yes 118216048
chr1 2162579 2162585 YY1 JASPAR yes 26224539
chr1 2162579 2162585 YY1 JASPAR yes 118216049
chr1 2162592 2162602 SP1 JASPAR yes 26224540
chr1 2162592 2162602 SP1 JASPAR yes 118216050
chr1 2162599 2162604 SP1 TRANSFAC yes 26224541
chr1 2162599 2162604 SP1 TRANSFAC yes 118216051
chr1 2162613 2162631 ESR1 JASPAR yes 26224542
chr1 2162613 2162631 ESR1 JASPAR yes 118216052
chr1 2162619 2162640 REST JASPAR yes 26224543
chr1 2162619 2162640 REST JASPAR yes 118216053
chr1 2162634 2162649 RUNX2 JASPAR yes 26224544
chr1 2162634 2162649 RUNX2 JASPAR yes 118216054
chr1 2162636 2162647 TFAP2C JASPAR yes 26224545
chr1 2162636 2162647 TFAP2C JASPAR yes 118216055
chr1 2162647 2162653 PEA3 TRANSFAC yes 26224546
chr1 2162647 2162653 PEA3 TRANSFAC yes 118216056
chr1 2162653 2162663 MAX JASPAR yes 26224547
chr1 2162653 2162663 MAX JASPAR yes 118216057
chr1 2162653 2162664 USF2 JASPAR yes 26224548
chr1 2162653 2162664 USF2 JASPAR yes 118216058
chr1 2162661 2162671 ZNF740 JASPAR yes 26224549
chr1 2162661 2162671 ZNF740 JASPAR yes 118216059
chr1 2162665 2162681 ZNF143 JASPAR yes 26224550
chr1 2162665 2162681 ZNF143 JASPAR yes 118216060
chr1 2162667 2162682 RUNX2 JASPAR yes 26224551
chr1 2162667 2162682 RUNX2 JASPAR yes 118216061
chr1 2162688 2162704 GLIS1 JASPAR yes 26224552
chr1 2162688 2162704 GLIS1 JASPAR yes 118216062
chr1 2162697 2162703 ESR1 TRANSFAC yes 26224553
chr1 2162697 2162703 ESR1 TRANSFAC yes 118216063
chr1 2162699 2162703 ESR1 TRANSFAC yes 26224554
chr1 2162699 2162703 ESR1 TRANSFAC yes 118216064
chr1 2162699 2162710 USF1 JASPAR yes 26224555
chr1 2162699 2162710 USF2 JASPAR yes 26224556
chr1 2162699 2162710 USF1 JASPAR yes 118216065
chr1 2162699 2162710 USF2 JASPAR yes 118216066
chr1 2162699 2162714 SCRT1 JASPAR yes 26224557
chr1 2162699 2162714 SCRT1 JASPAR yes 118216067
chr1 2162700 2162707 USF2 TRANSFAC yes 26224558
chr1 2162700 2162707 USF2 TRANSFAC yes 118216068
chr1 2162701 2162714 SCRT2 JASPAR yes 26224559
chr1 2162701 2162714 SCRT2 JASPAR yes 118216069
chr1 2162702 2162707 USF2 TRANSFAC yes 26224560
chr1 2162702 2162707 USF2 TRANSFAC yes 118216070
chr1 2162704 2162719 RFX5 JASPAR yes 26224561
chr1 2162704 2162719 RFX5 JASPAR yes 118216071
chr1 2162734 2162748 BATF3 JASPAR yes 26224562
chr1 2162734 2162748 BATF3 JASPAR yes 118216072
chr1 2162736 2162746 SREBF1 JASPAR yes 26224563
chr1 2162736 2162746 SREBF1 JASPAR yes 118216073
chr1 2162739 2162744 ATF1 TRANSFAC yes 26224564
chr1 2162739 2162744 ATF1 TRANSFAC yes 118216074
chr1 2162741 2162762 REST JASPAR yes 26224565
chr1 2162741 2162762 REST JASPAR yes 118216075
chr1 2162742 2162761 REST JASPAR yes 26224566
chr1 2162742 2162761 REST JASPAR yes 118216076
chr1 2162745 2162749 NFE TRANSFAC yes 26224567
chr1 2162745 2162749 NFE TRANSFAC yes 118216077
chr1 2162758 2162767 THAP1 JASPAR yes 26224568
chr1 2162758 2162767 THAP1 JASPAR yes 118216078
chr1 2162759 2162765 YY1 JASPAR yes 26224569
chr1 2162759 2162765 YY1 JASPAR yes 118216079
chr1 2162809 2162823 RORA JASPAR yes 26224570
chr1 2162809 2162823 RORA JASPAR yes 118216080
chr1 2162809 2162829 RREB1 JASPAR yes 26224571
chr1 2162809 2162829 RREB1 JASPAR yes 118216081
chr1 2162815 2162821 ESR1 TRANSFAC yes 26224572
chr1 2162815 2162821 ESR1 TRANSFAC yes 118216082
chr1 2162815 2162835 TP53 JASPAR yes 26224573
chr1 2162815 2162835 TP53 JASPAR yes 118216083
chr1 2162817 2162821 ESR1 TRANSFAC yes 26224574
chr1 2162817 2162821 ESR1 TRANSFAC yes 118216084
chr1 2162817 2162828 USF1 JASPAR yes 26224575
chr1 2162817 2162828 USF1 JASPAR yes 118216085
chr1 2162817 2162837 TP63 JASPAR yes 26224576
chr1 2162817 2162837 TP63 JASPAR yes 118216086
chr1 2162818 2162836 TP53 JASPAR yes 26224577
chr1 2162818 2162836 TP53 JASPAR yes 118216087
chr1 2162820 2162835 TP53 JASPAR yes 26224578
chr1 2162820 2162835 TP53 JASPAR yes 118216088
chr1 2162826 2162841 RUNX2 JASPAR yes 26224579
chr1 2162826 2162841 RUNX2 JASPAR yes 118216089
chr1 2162830 2162840 RUNX3 JASPAR yes 26224580
chr1 2162830 2162840 RUNX3 JASPAR yes 118216090
chr1 2162831 2162840 RUNX2 JASPAR yes 26224581
chr1 2162831 2162840 RUNX2 JASPAR yes 118216091
chr1 2162842 2162846 NFE TRANSFAC yes 26224582
chr1 2162842 2162846 NFE TRANSFAC yes 118216092
chr1 2162844 2162854 GABPA JASPAR yes 26224583
chr1 2162844 2162854 GABPA JASPAR yes 118216093
chr1 2162855 2162861 TCF4 TRANSFAC yes 26224584
chr1 2162855 2162861 TCF4 TRANSFAC yes 118216094
chr1 2162855 2162869 GLIS2 JASPAR yes 26224585
chr1 2162855 2162869 GLIS2 JASPAR yes 118216095
chr1 2162863 2162868 SP1 TRANSFAC yes 26224586
chr1 2162863 2162868 SP1 TRANSFAC yes 118216096
chr1 2162885 2162890 SP1 TRANSFAC yes 26224587
chr1 2162885 2162890 SP1 TRANSFAC yes 118216097
chr1 2162897 2162909 PKNOX1 JASPAR yes 26224588
chr1 2162897 2162909 PKNOX2 JASPAR yes 26224589
chr1 2162897 2162909 TGIF1 JASPAR yes 26224590
chr1 2162897 2162909 TGIF2 JASPAR yes 26224591
chr1 2162897 2162909 PKNOX1 JASPAR yes 118216098
chr1 2162897 2162909 PKNOX2 JASPAR yes 118216099
chr1 2162897 2162909 TGIF1 JASPAR yes 118216100
chr1 2162897 2162909 TGIF2 JASPAR yes 118216101
chr1 2162898 2162908 TFAP4 JASPAR yes 26224592
chr1 2162898 2162908 TFAP4 JASPAR yes 118216102
chr1 2162939 2162954 RUNX2 JASPAR yes 26224593
chr1 2162939 2162954 RUNX2 JASPAR yes 118216103
chr1 2162963 2162967 H4TF2 TRANSFAC yes 26224594
chr1 2162963 2162967 H4TF2 TRANSFAC yes 118216104
chr1 2162971 2162982 YY2 JASPAR yes 26224595
chr1 2162971 2162982 YY2 JASPAR yes 118216105
chr1 2162971 2162987 RFX3 JASPAR yes 26224596
chr1 2162971 2162987 RFX3 JASPAR yes 118216106
chr1 2162972 2162991 RFX2 JASPAR yes 26224597
chr1 2162972 2162991 RFX2 JASPAR yes 118216107
SNP sites on vista62[chr1:2162325-2162996]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 2162386 rs190316622 G C no 11975
chr1 2162392 rs552063715 C T no 11976
chr1 2162413 rs142037805 C T
TP63
11977
chr1 2162464 rs12145790 G C
SMAD2
11978
chr1 2162473 rs7536233 C T
SMAD2
11979
chr1 2162571 rs144559339 G T
RREB1 SP1
11980
chr1 2162656 rs398089083 C CCA
MAX USF2
11981
chr1 2162656 rs77234996 C CCA
MAX USF2
11982
chr1 2162797 rs531533148 G A no 11983
chr1 2162821 rs568010717 C T
ESR1 RORA RREB1 TP53 TP63 USF1
11984
chr1 2162885 rs150249221 T C
SP1
11985
chr1 2162944 rs590367 C T
RUNX2
11986
Genes possibly regulated by vista62[chr1:2162325-2162996]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 2115903 2144159 - C1orf86 ENSG00000162585.12 2144159 0.73 1.0 58 81834
chr1 2121237 2123179 + AL590822.2 ENSG00000269554.1 2121237 0.65 1.0 59 58912
chr1 2143360 2145620 - AL590822.1 ENSG00000203301.2 2145620 0.82 0.87 60 83295
chr1 2160134 2241558 + SKI ENSG00000157933.9 2160134 0.71 1.0 61 97809
chr1 2258581 2259042 + AL589739.1 ENSG00000269753.1 2258581 0.9 0.98 63 4415
Expression level of Genes
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miRNAs possibly regulated by vista62[chr1:2162325-2162996]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results