EnhancerDB
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  3. rs568010717[chr1:2162821]
Enhancers that have rs568010717[chr1:2162821]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2162230 2193653 enh11423
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 2162325 2162996 vista62
VISTA
Transcript factors that have rs568010717[chr1:2162821]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2162809 2162823 RORA JASPAR yes 26224570
chr1 2162809 2162823 RORA JASPAR yes 118216080
chr1 2162809 2162829 RREB1 JASPAR yes 26224571
chr1 2162809 2162829 RREB1 JASPAR yes 118216081
chr1 2162815 2162821 ESR1 TRANSFAC yes 26224572
chr1 2162815 2162821 ESR1 TRANSFAC yes 118216082
chr1 2162815 2162835 TP53 JASPAR yes 26224573
chr1 2162815 2162835 TP53 JASPAR yes 118216083
chr1 2162817 2162821 ESR1 TRANSFAC yes 26224574
chr1 2162817 2162821 ESR1 TRANSFAC yes 118216084
chr1 2162817 2162828 USF1 JASPAR yes 26224575
chr1 2162817 2162828 USF1 JASPAR yes 118216085
chr1 2162817 2162837 TP63 JASPAR yes 26224576
chr1 2162817 2162837 TP63 JASPAR yes 118216086
chr1 2162818 2162836 TP53 JASPAR yes 26224577
chr1 2162818 2162836 TP53 JASPAR yes 118216087
chr1 2162820 2162835 TP53 JASPAR yes 26224578
chr1 2162820 2162835 TP53 JASPAR yes 118216088
Genes associated with rs568010717[chr1:2162821], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More