EnhancerDB
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  3. rs144559339[chr1:2162571]
Enhancers that have rs144559339[chr1:2162571]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2162230 2193653 enh11423
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 2162325 2162996 vista62
VISTA
Transcript factors that have rs144559339[chr1:2162571]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2162557 2162577 RREB1 JASPAR yes 26224537
chr1 2162557 2162577 RREB1 JASPAR yes 118216047
chr1 2162570 2162575 SP1 TRANSFAC yes 26224538
chr1 2162570 2162575 SP1 TRANSFAC yes 118216048
Genes associated with rs144559339[chr1:2162571], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More