EnhancerDB
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  3. vista620[chr1:19804974-19805167]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista620[chr1:19804974-19805167]
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Tissue distribution of vista620
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Transcription factor that possibly regulate vista620[chr1:19804974-19805167]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 19804967 19804987 RREB1 JASPAR yes 27196109
chr1 19804967 19804987 RREB1 JASPAR yes 118243635
chr1 19804982 19804985 MYB TRANSFAC yes 27196110
chr1 19804982 19804985 MYB TRANSFAC yes 118243636
chr1 19804983 19804999 SOX8 JASPAR yes 27196111
chr1 19804983 19804999 SOX8 JASPAR yes 118243637
chr1 19805044 19805054 SREBF1 JASPAR yes 27196112
chr1 19805044 19805054 SREBF2 JASPAR yes 27196113
chr1 19805044 19805054 SREBF1 JASPAR yes 118243638
chr1 19805044 19805054 SREBF2 JASPAR yes 118243639
chr1 19805058 19805064 PEA3 TRANSFAC yes 27196114
chr1 19805058 19805064 PEA3 TRANSFAC yes 118243640
chr1 19805066 19805076 NFATC3 JASPAR yes 27196115
chr1 19805066 19805076 NFATC3 JASPAR yes 118243641
chr1 19805068 19805074 ETS1 JASPAR yes 27196116
chr1 19805068 19805074 ETS1 JASPAR yes 118243642
chr1 19805098 19805102 NFE TRANSFAC yes 27196117
chr1 19805098 19805102 NFE TRANSFAC yes 118243643
chr1 19805111 19805121 RELA JASPAR yes 27196118
chr1 19805111 19805121 RELA JASPAR yes 118243644
chr1 19805111 19805122 NFKB1 JASPAR yes 27196119
chr1 19805111 19805122 NFKB1 JASPAR yes 118243645
chr1 19805114 19805134 TP53 JASPAR yes 27196120
chr1 19805114 19805134 TP53 JASPAR yes 118243646
chr1 19805117 19805123 MZF1 JASPAR yes 27196121
chr1 19805117 19805123 MZF1 JASPAR yes 118243647
chr1 19805151 19805172 REST JASPAR yes 27196122
chr1 19805151 19805172 REST JASPAR yes 118243648
chr1 19805153 19805168 HNF4A JASPAR yes 27196123
chr1 19805153 19805168 HNF4A JASPAR yes 118243649
chr1 19805154 19805169 HNF4G JASPAR yes 27196124
chr1 19805154 19805169 HNF4G JASPAR yes 118243650
chr1 19805154 19805174 TP53 JASPAR yes 27196125
chr1 19805154 19805174 TP53 JASPAR yes 118243651
chr1 19805159 19805177 NR3C1 JASPAR yes 27196126
chr1 19805159 19805177 NR3C1 JASPAR yes 118243652
SNP sites on vista620[chr1:19804974-19805167]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 19804988 rs140946349 C T
SOX8
132362
chr1 19805057 rs114599584 T C no 132363
chr1 19805161 rs540516494 T TTGGACATACTTGCTTCCACC
HNF4A HNF4G NR3C1 REST TP53
132364
Genes possibly regulated by vista620[chr1:19804974-19805167]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 19665267 19812066 - CAPZB ENSG00000077549.13 19812066 0.66 0.99 262 93101
Expression level of Genes
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miRNAs possibly regulated by vista620[chr1:19804974-19805167]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results