EnhancerDB
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  3. rs540516494[chr1:19805161]
Enhancers that have rs540516494[chr1:19805161]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19801145 19810806 enh11569
Bone Marrow (K562) Brain (SK-N-SH) Blood (T-cell) Astrocyte Blood (OCI-LY7) Stomach Placenta Thyroid Embryonic Stem Cell Line (H1-hESC) Thymus Heart
chr1 19804974 19805167 vista620
VISTA
Transcript factors that have rs540516494[chr1:19805161]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19805151 19805172 REST JASPAR yes 27196122
chr1 19805151 19805172 REST JASPAR yes 118243648
chr1 19805153 19805168 HNF4A JASPAR yes 27196123
chr1 19805153 19805168 HNF4A JASPAR yes 118243649
chr1 19805154 19805169 HNF4G JASPAR yes 27196124
chr1 19805154 19805169 HNF4G JASPAR yes 118243650
chr1 19805154 19805174 TP53 JASPAR yes 27196125
chr1 19805154 19805174 TP53 JASPAR yes 118243651
chr1 19805159 19805177 NR3C1 JASPAR yes 27196126
chr1 19805159 19805177 NR3C1 JASPAR yes 118243652
Genes associated with rs540516494[chr1:19805161], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More