EnhancerDB
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  3. vista730[chr1:23426690-23427100]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista730[chr1:23426690-23427100]
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Tissue distribution of vista730
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Transcription factor that possibly regulate vista730[chr1:23426690-23427100]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 23426708 23426726 MAFF JASPAR yes 27412040
chr1 23426708 23426726 MAFF JASPAR yes 118248767
chr1 23426727 23426737 POU6F2 JASPAR yes 27412041
chr1 23426727 23426737 POU6F2 JASPAR yes 118248768
chr1 23426728 23426738 ALX3 JASPAR yes 27412042
chr1 23426728 23426738 EMX1 JASPAR yes 27412043
chr1 23426728 23426738 EMX2 JASPAR yes 27412044
chr1 23426728 23426738 ESX1 JASPAR yes 27412045
chr1 23426728 23426738 EVX1 JASPAR yes 27412046
chr1 23426728 23426738 EVX2 JASPAR yes 27412047
chr1 23426728 23426738 GBX1 JASPAR yes 27412048
chr1 23426728 23426738 GSX1 JASPAR yes 27412049
chr1 23426728 23426738 HOXA2 JASPAR yes 27412050
chr1 23426728 23426738 HOXB2 JASPAR yes 27412051
chr1 23426728 23426738 LHX2 JASPAR yes 27412052
chr1 23426728 23426738 MEOX1 JASPAR yes 27412053
chr1 23426728 23426738 NOTO JASPAR yes 27412054
chr1 23426728 23426738 ALX3 JASPAR yes 118248769
chr1 23426728 23426738 EMX1 JASPAR yes 118248770
chr1 23426728 23426738 EMX2 JASPAR yes 118248771
chr1 23426728 23426738 ESX1 JASPAR yes 118248772
chr1 23426728 23426738 EVX1 JASPAR yes 118248773
chr1 23426728 23426738 EVX2 JASPAR yes 118248774
chr1 23426728 23426738 GBX1 JASPAR yes 118248775
chr1 23426728 23426738 GSX1 JASPAR yes 118248776
chr1 23426728 23426738 HOXA2 JASPAR yes 118248777
chr1 23426728 23426738 HOXB2 JASPAR yes 118248778
chr1 23426728 23426738 LHX2 JASPAR yes 118248779
chr1 23426728 23426738 MEOX1 JASPAR yes 118248780
chr1 23426728 23426738 NOTO JASPAR yes 118248781
chr1 23426729 23426737 LBX1 JASPAR yes 27412055
chr1 23426729 23426737 PDX1 JASPAR yes 27412056
chr1 23426729 23426737 VAX1 JASPAR yes 27412057
chr1 23426729 23426737 VAX2 JASPAR yes 27412058
chr1 23426729 23426737 VSX1 JASPAR yes 27412059
chr1 23426729 23426737 VSX2 JASPAR yes 27412060
chr1 23426729 23426737 LBX1 JASPAR yes 118248782
chr1 23426729 23426737 PDX1 JASPAR yes 118248783
chr1 23426729 23426737 VAX1 JASPAR yes 118248784
chr1 23426729 23426737 VAX2 JASPAR yes 118248785
chr1 23426729 23426737 VSX1 JASPAR yes 118248786
chr1 23426729 23426737 VSX2 JASPAR yes 118248787
chr1 23426756 23426762 NFIC JASPAR yes 27412061
chr1 23426756 23426762 NFIC JASPAR yes 118248788
chr1 23426767 23426771 YY1 TRANSFAC yes 27412062
chr1 23426767 23426771 YY1 TRANSFAC yes 118248789
chr1 23426770 23426773 MYB TRANSFAC yes 27412063
chr1 23426770 23426773 MYB TRANSFAC yes 118248790
chr1 23426781 23426793 TEAD1 JASPAR yes 27412064
chr1 23426781 23426793 TEAD1 JASPAR yes 118248791
chr1 23426794 23426807 DUXA JASPAR yes 27412065
chr1 23426794 23426807 JUN JASPAR yes 27412066
chr1 23426794 23426807 DUXA JASPAR yes 118248792
chr1 23426794 23426807 JUN JASPAR yes 118248793
chr1 23426794 23426808 RORA JASPAR yes 27412067
chr1 23426794 23426808 RORA JASPAR yes 118248794
chr1 23426795 23426806 DUX4 JASPAR yes 27412068
chr1 23426795 23426806 DUX4 JASPAR yes 118248795
chr1 23426812 23426818 SOX10 JASPAR yes 27412069
chr1 23426812 23426818 SOX10 JASPAR yes 118248796
chr1 23426815 23426830 FOXP1 JASPAR yes 27412070
chr1 23426815 23426830 FOXP1 JASPAR yes 118248797
chr1 23426818 23426829 FOXP2 JASPAR yes 27412071
chr1 23426818 23426829 FOXP2 JASPAR yes 118248798
chr1 23426821 23426833 TAL1 JASPAR yes 27412072
chr1 23426821 23426833 TAL1 JASPAR yes 118248799
chr1 23426823 23426833 NEUROG2 JASPAR yes 27412073
chr1 23426823 23426833 NEUROG2 JASPAR yes 118248800
chr1 23426823 23426835 TAL1 JASPAR yes 27412074
chr1 23426823 23426835 TAL1 JASPAR yes 118248801
chr1 23426827 23426833 YY1 JASPAR yes 27412075
chr1 23426827 23426833 YY1 JASPAR yes 118248802
chr1 23426877 23426889 PBX1 JASPAR yes 27412076
chr1 23426877 23426889 PBX1 JASPAR yes 118248803
chr1 23426878 23426893 JUND JASPAR yes 27412077
chr1 23426878 23426893 JUND JASPAR yes 118248804
chr1 23426879 23426892 JUN JASPAR yes 27412078
chr1 23426879 23426892 JUN JASPAR yes 118248805
chr1 23426881 23426896 JUND JASPAR yes 27412079
chr1 23426881 23426896 JUND JASPAR yes 118248806
chr1 23426894 23426908 TLX1 JASPAR yes 27412080
chr1 23426894 23426908 TLX1 JASPAR yes 118248807
chr1 23426907 23426918 CEBPB JASPAR yes 27412081
chr1 23426907 23426918 CEBPB JASPAR yes 118248808
chr1 23426908 23426918 CEBPB JASPAR yes 27412082
chr1 23426908 23426918 CEBPD JASPAR yes 27412083
chr1 23426908 23426918 CEBPE JASPAR yes 27412084
chr1 23426908 23426918 CEBPG JASPAR yes 27412085
chr1 23426908 23426918 CEBPB JASPAR yes 118248809
chr1 23426908 23426918 CEBPD JASPAR yes 118248810
chr1 23426908 23426918 CEBPE JASPAR yes 118248811
chr1 23426908 23426918 CEBPG JASPAR yes 118248812
chr1 23426908 23426919 CEBPA JASPAR yes 27412086
chr1 23426908 23426919 CEBPA JASPAR yes 118248813
chr1 23426922 23426931 RUNX2 JASPAR yes 27412087
chr1 23426922 23426931 RUNX2 JASPAR yes 118248814
chr1 23426922 23426932 RUNX3 JASPAR yes 27412088
chr1 23426922 23426932 RUNX3 JASPAR yes 118248815
chr1 23426922 23426933 RUNX1 JASPAR yes 27412089
chr1 23426922 23426933 RUNX1 JASPAR yes 118248816
chr1 23426935 23426947 INSM1 JASPAR yes 27412090
chr1 23426935 23426947 INSM1 JASPAR yes 118248817
chr1 23426935 23426950 NR2C2 JASPAR yes 27412091
chr1 23426935 23426950 NR2C2 JASPAR yes 118248818
chr1 23426946 23426957 STAT1 JASPAR yes 27412092
chr1 23426946 23426957 STAT3 JASPAR yes 27412093
chr1 23426946 23426957 STAT1 JASPAR yes 118248819
chr1 23426946 23426957 STAT3 JASPAR yes 118248820
chr1 23426950 23426961 NFKB1 JASPAR yes 27412094
chr1 23426950 23426961 NFKB1 JASPAR yes 118248821
chr1 23426951 23426956 ETS2 TRANSFAC yes 27412095
chr1 23426951 23426956 ETS2 TRANSFAC yes 118248822
chr1 23426979 23426991 FOXI1 JASPAR yes 27412096
chr1 23426979 23426991 FOXI1 JASPAR yes 118248823
chr1 23426981 23426995 SPIC JASPAR yes 27412097
chr1 23426981 23426995 SPIC JASPAR yes 118248824
chr1 23426994 23427008 TCF7L2 JASPAR yes 27412098
chr1 23426994 23427008 TCF7L2 JASPAR yes 118248825
chr1 23426994 23427009 LEF1 JASPAR yes 27412099
chr1 23426994 23427009 LEF1 JASPAR yes 118248826
chr1 23427000 23427020 RREB1 JASPAR yes 27412100
chr1 23427000 23427020 RREB1 JASPAR yes 118248827
chr1 23427003 23427018 RUNX2 JASPAR yes 27412101
chr1 23427003 23427018 RUNX2 JASPAR yes 118248828
chr1 23427004 23427013 RUNX2 JASPAR yes 27412102
chr1 23427004 23427013 RUNX2 JASPAR yes 118248829
chr1 23427004 23427014 RUNX3 JASPAR yes 27412103
chr1 23427004 23427014 RUNX3 JASPAR yes 118248830
chr1 23427004 23427015 RUNX1 JASPAR yes 27412104
chr1 23427004 23427015 RUNX1 JASPAR yes 118248831
chr1 23427019 23427026 PEA3 TRANSFAC yes 27412105
chr1 23427019 23427026 PEA3 TRANSFAC yes 118248832
chr1 23427071 23427075 YY1 TRANSFAC yes 27412106
chr1 23427071 23427075 YY1 TRANSFAC yes 118248833
chr1 23427073 23427088 HSF1 JASPAR yes 27412107
chr1 23427073 23427088 HSF1 JASPAR yes 118248834
chr1 23427074 23427087 HSF2 JASPAR yes 27412108
chr1 23427074 23427087 HSF2 JASPAR yes 118248835
SNP sites on vista730[chr1:23426690-23427100]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 23426693 rs35406425 C T no 156583
chr1 23426751 rs575883667 G A no 156584
chr1 23426799 rs544868704 C A,T
DUX4 DUXA JUN RORA
156585
chr1 23426994 rs117035586 T C
LEF1 SPIC TCF7L2
156586
chr1 23427042 rs373107739 C T no 156587
Genes possibly regulated by vista730[chr1:23426690-23427100]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 23337327 23342343 - C1orf234 ENSG00000227868.2 23342343 0.79 0.8 306 15653
chr1 23345941 23410182 + KDM1A ENSG00000004487.11 23345941 0.62 0.99 307 19251
chr1 23410516 23504301 - LUZP1 ENSG00000169641.9 23504301 0.74 0.99 308 22799
chr1 23516993 23521222 - HTR1D ENSG00000179546.3 23521222 0.8 1.0 309 5878
Expression level of Genes
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miRNAs possibly regulated by vista730[chr1:23426690-23427100]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results