EnhancerDB
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  3. rs544868704[chr1:23426799]
Enhancers that have rs544868704[chr1:23426799]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23421969 23432217 enh11605
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 23426690 23427100 vista730
VISTA
Transcript factors that have rs544868704[chr1:23426799]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23426352 23427375 AR GTRD no Prostate (PC-3) 107802408
chr1 23426794 23426807 DUXA JASPAR yes 27412065
chr1 23426794 23426807 JUN JASPAR yes 27412066
chr1 23426794 23426807 DUXA JASPAR yes 118248792
chr1 23426794 23426807 JUN JASPAR yes 118248793
chr1 23426794 23426808 RORA JASPAR yes 27412067
chr1 23426794 23426808 RORA JASPAR yes 118248794
chr1 23426795 23426806 DUX4 JASPAR yes 27412068
chr1 23426795 23426806 DUX4 JASPAR yes 118248795
Genes associated with rs544868704[chr1:23426799], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More