EnhancerDB
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  3. rs117035586[chr1:23426994]
Enhancers that have rs117035586[chr1:23426994]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23421969 23432217 enh11605
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 23426690 23427100 vista730
VISTA
Transcript factors that have rs117035586[chr1:23426994]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23426352 23427375 AR GTRD no Prostate (PC-3) 107802408
chr1 23426981 23426995 SPIC JASPAR yes 27412097
chr1 23426981 23426995 SPIC JASPAR yes 118248824
chr1 23426994 23427008 TCF7L2 JASPAR yes 27412098
chr1 23426994 23427008 TCF7L2 JASPAR yes 118248825
chr1 23426994 23427009 LEF1 JASPAR yes 27412099
chr1 23426994 23427009 LEF1 JASPAR yes 118248826
Genes associated with rs117035586[chr1:23426994], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More