EnhancerDB
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  3. vista913[chr1:27772061-27772370]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista913[chr1:27772061-27772370]
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Tissue distribution of vista913
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Transcription factor that possibly regulate vista913[chr1:27772061-27772370]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27772065 27772076 TBX2 JASPAR yes 27695070
chr1 27772065 27772076 TBX2 JASPAR yes 118257668
chr1 27772070 27772080 GSX1 JASPAR yes 27695071
chr1 27772070 27772080 GSX2 JASPAR yes 27695072
chr1 27772070 27772080 HOXA2 JASPAR yes 27695073
chr1 27772070 27772080 HOXB2 JASPAR yes 27695074
chr1 27772070 27772080 HOXB3 JASPAR yes 27695075
chr1 27772070 27772080 LHX2 JASPAR yes 27695076
chr1 27772070 27772080 MEOX1 JASPAR yes 27695077
chr1 27772070 27772080 MEOX2 JASPAR yes 27695078
chr1 27772070 27772080 NOTO JASPAR yes 27695079
chr1 27772070 27772080 GSX1 JASPAR yes 118257669
chr1 27772070 27772080 GSX2 JASPAR yes 118257670
chr1 27772070 27772080 HOXA2 JASPAR yes 118257671
chr1 27772070 27772080 HOXB2 JASPAR yes 118257672
chr1 27772070 27772080 HOXB3 JASPAR yes 118257673
chr1 27772070 27772080 LHX2 JASPAR yes 118257674
chr1 27772070 27772080 MEOX1 JASPAR yes 118257675
chr1 27772070 27772080 MEOX2 JASPAR yes 118257676
chr1 27772070 27772080 NOTO JASPAR yes 118257677
chr1 27772071 27772079 NKX6-1 JASPAR yes 27695080
chr1 27772071 27772079 NKX6-2 JASPAR yes 27695081
chr1 27772071 27772079 NKX6-1 JASPAR yes 118257678
chr1 27772071 27772079 NKX6-2 JASPAR yes 118257679
chr1 27772071 27772081 POU6F2 JASPAR yes 27695082
chr1 27772071 27772081 POU6F2 JASPAR yes 118257680
chr1 27772079 27772083 TEAD2 TRANSFAC yes 27695083
chr1 27772079 27772083 TEAD2 TRANSFAC yes 118257681
chr1 27772081 27772084 MYB TRANSFAC yes 27695084
chr1 27772081 27772084 MYB TRANSFAC yes 118257682
chr1 27772088 27772103 PRDM1 JASPAR yes 27695085
chr1 27772088 27772103 PRDM1 JASPAR yes 118257683
chr1 27772093 27772104 E2F6 JASPAR yes 27695086
chr1 27772093 27772104 E2F6 JASPAR yes 118257684
chr1 27772109 27772113 H1TF2 TRANSFAC yes 27695087
chr1 27772109 27772113 NFE TRANSFAC yes 27695088
chr1 27772109 27772113 SRF TRANSFAC yes 27695089
chr1 27772109 27772113 H1TF2 TRANSFAC yes 118257685
chr1 27772109 27772113 NFE TRANSFAC yes 118257686
chr1 27772109 27772113 SRF TRANSFAC yes 118257687
chr1 27772116 27772129 ZBTB18 JASPAR yes 27695090
chr1 27772116 27772129 ZBTB18 JASPAR yes 118257688
chr1 27772130 27772140 NFKB1 JASPAR yes 27695091
chr1 27772130 27772140 NFKB1 JASPAR yes 118257689
chr1 27772143 27772154 STAT1 JASPAR yes 27695092
chr1 27772143 27772154 STAT1 JASPAR yes 118257690
chr1 27772144 27772149 ETS2 TRANSFAC yes 27695093
chr1 27772144 27772149 ETS2 TRANSFAC yes 118257691
chr1 27772153 27772167 FOXF2 JASPAR yes 27695094
chr1 27772153 27772167 FOXF2 JASPAR yes 118257692
chr1 27772153 27772168 FOXP1 JASPAR yes 27695095
chr1 27772153 27772168 FOXP1 JASPAR yes 118257693
chr1 27772155 27772167 FOXC2 JASPAR yes 27695096
chr1 27772155 27772167 FOXC2 JASPAR yes 118257694
chr1 27772158 27772166 FOXG1 JASPAR yes 27695097
chr1 27772158 27772166 FOXG1 JASPAR yes 118257695
chr1 27772160 27772166 HiNF-A TRANSFAC yes 27695098
chr1 27772160 27772166 HiNF-A TRANSFAC yes 118257696
chr1 27772171 27772175 YY1 TRANSFAC yes 27695099
chr1 27772171 27772175 YY1 TRANSFAC yes 118257697
chr1 27772188 27772202 GATA2 JASPAR yes 27695100
chr1 27772188 27772202 GATA2 JASPAR yes 118257698
chr1 27772190 27772197 GATA3 TRANSFAC yes 27695101
chr1 27772190 27772197 GATA3 TRANSFAC yes 118257699
chr1 27772190 27772198 GATA5 JASPAR yes 27695102
chr1 27772190 27772198 GATA5 JASPAR yes 118257700
chr1 27772193 27772196 MYB TRANSFAC yes 27695103
chr1 27772193 27772196 MYB TRANSFAC yes 118257701
chr1 27772225 27772236 FOXP2 JASPAR yes 27695104
chr1 27772225 27772236 FOXP2 JASPAR yes 118257702
chr1 27772227 27772235 FOXO3 JASPAR yes 27695105
chr1 27772227 27772235 FOXO3 JASPAR yes 118257703
chr1 27772245 27772249 YY1 TRANSFAC yes 27695106
chr1 27772245 27772249 YY1 TRANSFAC yes 118257704
chr1 27772277 27772285 GATA3 JASPAR yes 27695107
chr1 27772277 27772285 GATA3 JASPAR yes 118257705
chr1 27772289 27772293 H4TF2 TRANSFAC yes 27695108
chr1 27772289 27772293 H4TF2 TRANSFAC yes 118257706
chr1 27772298 27772316 IRF2 JASPAR yes 27695109
chr1 27772298 27772316 IRF2 JASPAR yes 118257707
chr1 27772303 27772317 IRF8 JASPAR yes 27695110
chr1 27772303 27772317 IRF8 JASPAR yes 118257708
chr1 27772303 27772318 IRF9 JASPAR yes 27695111
chr1 27772303 27772318 IRF9 JASPAR yes 118257709
chr1 27772305 27772326 IRF1 JASPAR yes 27695112
chr1 27772305 27772326 IRF1 JASPAR yes 118257710
chr1 27772307 27772322 PRDM1 JASPAR yes 27695113
chr1 27772307 27772322 STAT2 JASPAR yes 27695114
chr1 27772307 27772322 PRDM1 JASPAR yes 118257711
chr1 27772307 27772322 STAT2 JASPAR yes 118257712
chr1 27772308 27772322 STAT1 JASPAR yes 27695115
chr1 27772308 27772322 STAT1 JASPAR yes 118257713
chr1 27772318 27772333 FOXP1 JASPAR yes 27695116
chr1 27772318 27772333 FOXP1 JASPAR yes 118257714
chr1 27772321 27772329 FOXO3 JASPAR yes 27695117
chr1 27772321 27772329 FOXO3 JASPAR yes 118257715
chr1 27772323 27772341 MAFF JASPAR yes 27695118
chr1 27772323 27772341 MAFF JASPAR yes 118257716
chr1 27772346 27772364 NR3C1 JASPAR yes 27695119
chr1 27772346 27772364 NR3C1 JASPAR yes 118257717
chr1 27772347 27772368 IRF1 JASPAR yes 27695120
chr1 27772347 27772368 IRF1 JASPAR yes 118257718
chr1 27772349 27772364 STAT2 JASPAR yes 27695121
chr1 27772349 27772364 STAT2 JASPAR yes 118257719
chr1 27772352 27772367 FOXP1 JASPAR yes 27695122
chr1 27772352 27772367 FOXP1 JASPAR yes 118257720
chr1 27772353 27772368 FOXP1 JASPAR yes 27695123
chr1 27772353 27772368 FOXP1 JASPAR yes 118257721
chr1 27772354 27772369 FOXP1 JASPAR yes 27695124
chr1 27772354 27772369 FOXP1 JASPAR yes 118257722
chr1 27772355 27772370 FOXP1 JASPAR yes 27695125
chr1 27772355 27772370 FOXP1 JASPAR yes 118257723
chr1 27772356 27772371 FOXP1 JASPAR yes 27695126
chr1 27772356 27772371 FOXP1 JASPAR yes 118257724
SNP sites on vista913[chr1:27772061-27772370]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27772069 rs114354264 G T
TBX2
185856
chr1 27772088 rs544048083 A G
PRDM1
185857
chr1 27772338 rs143018708 T C
MAFF
185858
chr1 27772343 rs528584019 T C no 185859
chr1 27772353 rs557290282 C CT
FOXP1 IRF1 NR3C1 STAT2
185860
chr1 27772362 rs60938713 T G
FOXP1 IRF1 NR3C1 STAT2
185861
Genes possibly regulated by vista913[chr1:27772061-27772370]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27681675 27693383 - MAP3K6 ENSG00000142733.10 27693383 0.78 1.0 388 21322
chr1 27695603 27701315 - FCN3 ENSG00000142748.8 27701315 0.99 1.0 389 29254
chr1 27705666 27709870 - CD164L2 ENSG00000174950.6 27709870 0.92 1.0 390 37809
chr1 27719148 27722318 + GPR3 ENSG00000181773.6 27719148 0.8 1.0 391 47087
chr1 27730730 27816669 - WASF2 ENSG00000158195.6 27816669 0.61 1.0 392 55701
Expression level of Genes
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miRNAs possibly regulated by vista913[chr1:27772061-27772370]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results