EnhancerDB
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  3. rs557290282[chr1:27772353]
Enhancers that have rs557290282[chr1:27772353]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27742945 27784244 enh174
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 27772061 27772370 vista913
VISTA
Transcript factors that have rs557290282[chr1:27772353]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27772346 27772364 NR3C1 JASPAR yes 27695119
chr1 27772346 27772364 NR3C1 JASPAR yes 118257717
chr1 27772347 27772368 IRF1 JASPAR yes 27695120
chr1 27772347 27772368 IRF1 JASPAR yes 118257718
chr1 27772349 27772364 STAT2 JASPAR yes 27695121
chr1 27772349 27772364 STAT2 JASPAR yes 118257719
chr1 27772352 27772367 FOXP1 JASPAR yes 27695122
chr1 27772352 27772367 FOXP1 JASPAR yes 118257720
chr1 27772353 27772368 FOXP1 JASPAR yes 27695123
chr1 27772353 27772368 FOXP1 JASPAR yes 118257721
Genes associated with rs557290282[chr1:27772353], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More