EnhancerDB
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  3. rs544048083[chr1:27772088]
Enhancers that have rs544048083[chr1:27772088]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27742945 27784244 enh174
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 27772061 27772370 vista913
VISTA
Transcript factors that have rs544048083[chr1:27772088]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27771606 27772236 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802579
chr1 27772088 27772103 PRDM1 JASPAR yes 27695085
chr1 27772088 27772103 PRDM1 JASPAR yes 118257683
Genes associated with rs544048083[chr1:27772088], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More