EnhancerDB
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  3. vista935[chr1:27926165-27926491]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista935[chr1:27926165-27926491]
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Tissue distribution of vista935
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Transcription factor that possibly regulate vista935[chr1:27926165-27926491]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27926165 27926179 PLAG1 JASPAR yes 27714689
chr1 27926165 27926179 PLAG1 JASPAR yes 118258946
chr1 27926183 27926194 E2F4 JASPAR yes 27714690
chr1 27926183 27926194 E2F6 JASPAR yes 27714691
chr1 27926183 27926194 E2F4 JASPAR yes 118258947
chr1 27926183 27926194 E2F6 JASPAR yes 118258948
chr1 27926183 27926197 E2F7 JASPAR yes 27714692
chr1 27926183 27926197 E2F7 JASPAR yes 118258949
chr1 27926184 27926191 E2F1 TRANSFAC yes 27714693
chr1 27926184 27926191 E2F1 TRANSFAC yes 118258950
chr1 27926184 27926192 E2F1 JASPAR yes 27714694
chr1 27926184 27926192 E2F1 JASPAR yes 118258951
chr1 27926192 27926203 CDX2 JASPAR yes 27714695
chr1 27926192 27926203 CDX2 JASPAR yes 118258952
chr1 27926195 27926199 TEAD2 TRANSFAC yes 27714696
chr1 27926195 27926199 TEAD2 TRANSFAC yes 118258953
chr1 27926197 27926200 MYB TRANSFAC yes 27714697
chr1 27926197 27926200 MYB TRANSFAC yes 118258954
chr1 27926210 27926220 NFIA JASPAR yes 27714698
chr1 27926210 27926220 NFIA JASPAR yes 118258955
chr1 27926211 27926220 NFIX JASPAR yes 27714699
chr1 27926211 27926220 NFIX JASPAR yes 118258956
chr1 27926212 27926218 NFIC JASPAR yes 27714700
chr1 27926212 27926218 NFIC JASPAR yes 118258957
chr1 27926223 27926228 USF2 TRANSFAC yes 27714701
chr1 27926223 27926228 USF2 TRANSFAC yes 118258958
chr1 27926228 27926243 SCRT1 JASPAR yes 27714702
chr1 27926228 27926243 SCRT1 JASPAR yes 118258959
chr1 27926230 27926249 CTCF JASPAR yes 27714703
chr1 27926230 27926249 CTCF JASPAR yes 118258960
chr1 27926248 27926263 TFAP2A JASPAR yes 27714704
chr1 27926248 27926263 TFAP2A JASPAR yes 118258961
chr1 27926262 27926267 SP1 TRANSFAC yes 27714705
chr1 27926262 27926267 SP1 TRANSFAC yes 118258962
chr1 27926264 27926278 GLIS2 JASPAR yes 27714706
chr1 27926264 27926278 GLIS2 JASPAR yes 118258963
chr1 27926273 27926277 H4TF2 TRANSFAC yes 27714707
chr1 27926273 27926277 H4TF2 TRANSFAC yes 118258964
chr1 27926304 27926308 YY1 TRANSFAC yes 27714708
chr1 27926304 27926308 YY1 TRANSFAC yes 118258965
chr1 27926308 27926313 TFAP2A TRANSFAC yes 27714709
chr1 27926308 27926313 TFAP2A TRANSFAC yes 118258966
chr1 27926308 27926314 MZF1 JASPAR yes 27714710
chr1 27926308 27926314 MZF1 JASPAR yes 118258967
chr1 27926308 27926329 ZNF263 JASPAR yes 27714711
chr1 27926308 27926329 ZNF263 JASPAR yes 118258968
chr1 27926310 27926316 MAZ TRANSFAC yes 27714712
chr1 27926310 27926316 MAZ TRANSFAC yes 118258969
chr1 27926311 27926326 NR2C2 JASPAR yes 27714713
chr1 27926311 27926326 NR2C2 JASPAR yes 118258970
chr1 27926314 27926318 LFA1 TRANSFAC yes 27714714
chr1 27926314 27926318 LFA1 TRANSFAC yes 118258971
chr1 27926326 27926347 REST JASPAR yes 27714715
chr1 27926326 27926347 REST JASPAR yes 118258972
chr1 27926337 27926351 STAT1 JASPAR yes 27714716
chr1 27926337 27926351 STAT1 JASPAR yes 118258973
chr1 27926346 27926356 MYF6 JASPAR yes 27714717
chr1 27926346 27926356 NEUROG2 JASPAR yes 27714718
chr1 27926346 27926356 MYF6 JASPAR yes 118258974
chr1 27926346 27926356 NEUROG2 JASPAR yes 118258975
chr1 27926348 27926352 YY1 TRANSFAC yes 27714719
chr1 27926348 27926352 YY1 TRANSFAC yes 118258976
chr1 27926370 27926374 NFE TRANSFAC yes 27714720
chr1 27926370 27926374 NFE TRANSFAC yes 118258977
chr1 27926373 27926394 ZNF263 JASPAR yes 27714721
chr1 27926373 27926394 ZNF263 JASPAR yes 118258978
chr1 27926375 27926381 MZF1 JASPAR yes 27714722
chr1 27926375 27926381 MZF1 JASPAR yes 118258979
chr1 27926381 27926392 E2F6 JASPAR yes 27714723
chr1 27926381 27926392 E2F6 JASPAR yes 118258980
chr1 27926384 27926399 ZIC3 JASPAR yes 27714724
chr1 27926384 27926399 ZIC3 JASPAR yes 118258981
chr1 27926408 27926429 ZNF263 JASPAR yes 27714725
chr1 27926408 27926429 ZNF263 JASPAR yes 118258982
chr1 27926409 27926422 SMAD2 JASPAR yes 27714726
chr1 27926409 27926422 SMAD2 JASPAR yes 118258983
chr1 27926411 27926422 E2F6 JASPAR yes 27714727
chr1 27926411 27926422 E2F6 JASPAR yes 118258984
chr1 27926411 27926432 ZNF263 JASPAR yes 27714728
chr1 27926411 27926432 ZNF263 JASPAR yes 118258985
chr1 27926414 27926422 TBX15 JASPAR yes 27714729
chr1 27926414 27926422 TBX15 JASPAR yes 118258986
chr1 27926414 27926423 ZEB1 JASPAR yes 27714730
chr1 27926414 27926423 ZEB1 JASPAR yes 118258987
chr1 27926414 27926435 ZNF263 JASPAR yes 27714731
chr1 27926414 27926435 ZNF263 JASPAR yes 118258988
chr1 27926415 27926425 FIGLA JASPAR yes 27714732
chr1 27926415 27926425 TCF4 JASPAR yes 27714733
chr1 27926415 27926425 FIGLA JASPAR yes 118258989
chr1 27926415 27926425 TCF4 JASPAR yes 118258990
chr1 27926416 27926425 SNAI2 JASPAR yes 27714734
chr1 27926416 27926425 SNAI2 JASPAR yes 118258991
chr1 27926417 27926422 USF2 TRANSFAC yes 27714735
chr1 27926417 27926422 USF2 TRANSFAC yes 118258992
chr1 27926420 27926424 NFE TRANSFAC yes 27714736
chr1 27926420 27926424 NFE TRANSFAC yes 118258993
chr1 27926420 27926441 ZNF263 JASPAR yes 27714737
chr1 27926420 27926441 ZNF263 JASPAR yes 118258994
chr1 27926426 27926437 E2F6 JASPAR yes 27714738
chr1 27926426 27926437 E2F6 JASPAR yes 118258995
chr1 27926439 27926451 TAL1 JASPAR yes 27714739
chr1 27926439 27926451 TAL1 JASPAR yes 118258996
chr1 27926440 27926453 ZBTB18 JASPAR yes 27714740
chr1 27926440 27926453 ZBTB18 JASPAR yes 118258997
chr1 27926442 27926463 ZNF263 JASPAR yes 27714741
chr1 27926442 27926463 ZNF263 JASPAR yes 118258998
chr1 27926458 27926478 RREB1 JASPAR yes 27714742
chr1 27926458 27926478 RREB1 JASPAR yes 118258999
SNP sites on vista935[chr1:27926165-27926491]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27926256 rs60473349 A G
TFAP2A
187294
chr1 27926265 rs397968149 G GC
GLIS2 SP1
187295
chr1 27926265 rs58004981 G GC,GCC
GLIS2 SP1
187296
chr1 27926445 rs143309746 A G,T
TAL1 ZBTB18 ZNF263
187297
Genes possibly regulated by vista935[chr1:27926165-27926491]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27860546 27930942 - AHDC1 ENSG00000126705.9 27930942 0.75 1.0 393 95549
chr1 27938575 27961788 - FGR ENSG00000000938.8 27961788 0.93 0.97 394 64703
chr1 27992572 27998729 - IFI6 ENSG00000126709.10 27998729 0.76 1.0 395 27762
Expression level of Genes
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miRNAs possibly regulated by vista935[chr1:27926165-27926491]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results