EnhancerDB
  1. Home
  2. SNP
  3. rs60473349[chr1:27926256]
Enhancers that have rs60473349[chr1:27926256]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
chr1 27926165 27926491 vista935
VISTA
Transcript factors that have rs60473349[chr1:27926256]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27925913 27927142 TCF7L2 GTRD no Colon (HCT116) 107802601
chr1 27926248 27926263 TFAP2A JASPAR yes 27714704
chr1 27926248 27926263 TFAP2A JASPAR yes 118258961
Genes associated with rs60473349[chr1:27926256], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More