EnhancerDB
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  3. rs58004981[chr1:27926265]
Enhancers that have rs58004981[chr1:27926265]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
chr1 27926165 27926491 vista935
VISTA
Transcript factors that have rs58004981[chr1:27926265]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27925913 27927142 TCF7L2 GTRD no Colon (HCT116) 107802601
chr1 27926262 27926267 SP1 TRANSFAC yes 27714705
chr1 27926262 27926267 SP1 TRANSFAC yes 118258962
chr1 27926264 27926278 GLIS2 JASPAR yes 27714706
chr1 27926264 27926278 GLIS2 JASPAR yes 118258963
Genes associated with rs58004981[chr1:27926265], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More