EnhancerDB
  1. Home
  2. SNP
  3. rs10062000[chr5:149525189]
Enhancers that have rs10062000[chr5:149525189]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 149515023 149530526 enh22711
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Lung (A549) Stomach Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs10062000[chr5:149525189]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 149525186 149525197 FOXA1 JASPAR yes 66863504
Genes associated with rs10062000[chr5:149525189], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr5 149546358 149564120 + CDX1 ENSG00000113722.12 149546358 21169 Thyroid 0.102681 5875
chr5 149546358 149564120 + CDX1 ENSG00000113722.12 149546358 21169 Lung 0.00249418 5875