EnhancerDB
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  3. rs10204379[chr2:69853548]
Enhancers that have rs10204379[chr2:69853548]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 69837905 69860755 enh18641
Prostate (PC-3) Epithelial (MCF-7) Large Intestine Blood (T-cell) Esophagus Astrocyte Blood (GM12878) Stomach Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs10204379[chr2:69853548]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 69853537 69853550 DUXA JASPAR yes 74854310
chr2 69853538 69853549 DUX4 JASPAR yes 74854311
chr2 69853538 69853549 PHOX2A JASPAR yes 74854312
chr2 69853538 69853549 PROP1 JASPAR yes 74854313
chr2 69853541 69853551 ALX3 JASPAR yes 74854314
chr2 69853541 69853551 EN2 JASPAR yes 74854315
chr2 69853541 69853551 ESX1 JASPAR yes 74854316
chr2 69853541 69853551 GBX2 JASPAR yes 74854317
chr2 69853541 69853551 GSX1 JASPAR yes 74854318
chr2 69853541 69853551 GSX2 JASPAR yes 74854319
chr2 69853541 69853551 HESX1 JASPAR yes 74854320
chr2 69853541 69853551 LBX2 JASPAR yes 74854321
chr2 69853541 69853551 LHX2 JASPAR yes 74854322
chr2 69853541 69853551 MIXL1 JASPAR yes 74854323
chr2 69853541 69853551 RAX JASPAR yes 74854324
chr2 69853542 69853550 BARX1 JASPAR yes 74854328
chr2 69853542 69853550 BSX JASPAR yes 74854329
chr2 69853542 69853550 DLX6 JASPAR yes 74854330
chr2 69853542 69853550 ISX JASPAR yes 74854331
chr2 69853542 69853550 LBX1 JASPAR yes 74854332
chr2 69853542 69853550 LHX9 JASPAR yes 74854333
chr2 69853542 69853550 MSX1 JASPAR yes 74854334
chr2 69853542 69853550 MSX2 JASPAR yes 74854335
chr2 69853542 69853550 NKX6-2 JASPAR yes 74854336
chr2 69853542 69853550 PRRX1 JASPAR yes 74854337
chr2 69853542 69853550 RAX2 JASPAR yes 74854338
chr2 69853542 69853550 SHOX JASPAR yes 74854339
chr2 69853542 69853550 UNCX JASPAR yes 74854340
chr2 69853542 69853552 HOXB13 JASPAR yes 74854341
chr2 69853545 69853555 TBR1 JASPAR yes 74854342
chr2 69853545 69853556 TBX2 JASPAR yes 74854343
chr2 69853547 69853550 MYB TRANSFAC yes 74854344
Genes associated with rs10204379[chr2:69853548], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More