EnhancerDB
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  3. rs10206946[chr2:235219567]
Enhancers that have rs10206946[chr2:235219567]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235207125 235220255 enh19338
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Lung (PC-9) Spleen Thymus Epithelial (MCF-7)
Transcript factors that have rs10206946[chr2:235219567]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235219559 235219569 ALX3 JASPAR yes 81865924
chr2 235219559 235219569 GSX1 JASPAR yes 81865925
chr2 235219559 235219569 GSX2 JASPAR yes 81865926
chr2 235219559 235219569 HOXB2 JASPAR yes 81865927
chr2 235219559 235219569 HOXB3 JASPAR yes 81865928
chr2 235219559 235219569 MEOX2 JASPAR yes 81865929
chr2 235219559 235219569 MIXL1 JASPAR yes 81865930
chr2 235219559 235219569 MNX1 JASPAR yes 81865931
chr2 235219559 235219570 HOXA10 JASPAR yes 81865932
chr2 235219560 235219568 LMX1A JASPAR yes 81865933
chr2 235219560 235219568 LMX1B JASPAR yes 81865934
chr2 235219560 235219568 NKX6-1 JASPAR yes 81865935
chr2 235219560 235219568 NKX6-2 JASPAR yes 81865936
chr2 235219560 235219568 PDX1 JASPAR yes 81865937
chr2 235219560 235219568 VAX1 JASPAR yes 81865938
chr2 235219560 235219568 VAX2 JASPAR yes 81865939
chr2 235219560 235219568 VSX1 JASPAR yes 81865940
Genes associated with rs10206946[chr2:235219567], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More