EnhancerDB
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  3. rs10207620[chr2:224694572]
Enhancers that have rs10207620[chr2:224694572]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 224677744 224699315 enh34325
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs10207620[chr2:224694572]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 224694552 224694573 IRF1 JASPAR yes 81292261
chr2 224694553 224694574 IRF1 JASPAR yes 81292262
chr2 224694554 224694574 RREB1 JASPAR yes 81292264
chr2 224694557 224694572 FOXP1 JASPAR yes 81292266
chr2 224694557 224694578 IRF1 JASPAR yes 81292267
chr2 224694558 224694579 IRF1 JASPAR yes 81292268
chr2 224694559 224694579 RREB1 JASPAR yes 81292269
chr2 224694561 224694576 FOXP1 JASPAR yes 81292270
chr2 224694563 224694578 FOXP1 JASPAR yes 81292271
chr2 224694563 224694584 IRF1 JASPAR yes 81292272
chr2 224694564 224694585 IRF1 JASPAR yes 81292273
chr2 224694565 224694577 FOXC2 JASPAR yes 81292274
chr2 224694565 224694585 RREB1 JASPAR yes 81292275
chr2 224694566 224694577 FOXP2 JASPAR yes 81292276
chr2 224694571 224694586 FOXP1 JASPAR yes 81292277
Genes associated with rs10207620[chr2:224694572], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More