EnhancerDB
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  3. rs1038420[chr16:85500403]
Enhancers that have rs1038420[chr16:85500403]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85477350 85511195 enh16870
Bone Marrow (K562) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1038420[chr16:85500403]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85500394 85500407 SMAD2 JASPAR yes 12065122
chr16 85500397 85500407 TBR1 JASPAR yes 12065123
chr16 85500398 85500408 TBX21 JASPAR yes 12065124
chr16 85500399 85500407 MGA JASPAR yes 12065125
chr16 85500399 85500407 TBX15 JASPAR yes 12065126
chr16 85500399 85500407 TBX1 JASPAR yes 12065127
chr16 85500399 85500407 TBX4 JASPAR yes 12065128
chr16 85500399 85500407 TBX5 JASPAR yes 12065129
chr16 85500399 85500408 ZEB1 JASPAR yes 12065130
chr16 85500399 85500411 PKNOX1 JASPAR yes 12065131
chr16 85500399 85500411 TGIF1 JASPAR yes 12065132
chr16 85500399 85500412 ZBTB18 JASPAR yes 12065133
chr16 85500400 85500410 FIGLA JASPAR yes 12065134
chr16 85500400 85500410 ID4 JASPAR yes 12065135
chr16 85500400 85500410 TCF3 JASPAR yes 12065136
chr16 85500400 85500410 TCF4 JASPAR yes 12065137
chr16 85500401 85500410 SNAI2 JASPAR yes 12065138
chr16 85500402 85500407 USF2 TRANSFAC yes 12065139
Genes associated with rs1038420[chr16:85500403], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More