EnhancerDB
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  3. rs1038424[chr16:85485588]
Enhancers that have rs1038424[chr16:85485588]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85477350 85511195 enh16870
Bone Marrow (K562) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1038424[chr16:85485588]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85484406 85487529 ZNF143 GTRD no Epithelial (MCF-7) 21726085
chr16 85484435 85486918 ZNF143 GTRD no Epithelial (MCF-7) 21726086
chr16 85484462 85486895 ZNF143 GTRD no Epithelial (MCF-7) 21726088
chr16 85484570 85485645 ZNF274 GTRD no Bone Marrow (K562) 21726089
chr16 85485581 85485596 STAT2 JASPAR yes 12062911
chr16 85485582 85485596 STAT1 JASPAR yes 12062912
chr16 85485583 85485598 IRF9 JASPAR yes 12062913
Genes associated with rs1038424[chr16:85485588], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More