EnhancerDB
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  3. rs10403546[chr19:3388246]
Enhancers that have rs10403546[chr19:3388246]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3362205 3392371 enh17862
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Cervix (HeLa-S3) Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs10403546[chr19:3388246]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3386265 3389100 TCF7L2 GTRD no Colon (HCT116) 21839142
chr19 3386265 3389100 TCF7L2 GTRD no Colon (HCT116) 108366435
chr19 3387135 3388928 ZNF143 GTRD no Epithelial (MCF-7) 21839143
chr19 3387135 3388928 ZNF143 GTRD no Epithelial (MCF-7) 108366436
chr19 3387338 3388621 TCF7L2 GTRD no Colon (HCT116) 21839144
chr19 3387338 3388621 TCF7L2 GTRD no Colon (HCT116) 108366437
chr19 3387348 3388375 ZNF143 GTRD no Epithelial (MCF-7) 21839145
chr19 3387348 3388375 ZNF143 GTRD no Epithelial (MCF-7) 108366438
chr19 3387358 3388469 TCF7L2 GTRD no Colon (HCT116) 21839146
chr19 3387358 3388469 TCF7L2 GTRD no Colon (HCT116) 108366439
chr19 3387406 3388317 ZNF143 GTRD no Epithelial (MCF-7) 21839147
chr19 3387406 3388317 ZNF143 GTRD no Epithelial (MCF-7) 108366440
chr19 3387418 3388580 ZNF274 GTRD no Cervix (HeLa-S3) 21839148
chr19 3387418 3388580 ZNF274 GTRD no Cervix (HeLa-S3) 108366441
chr19 3387420 3388361 ZNF143 GTRD no Epithelial (MCF-7) 21839149
chr19 3387420 3388361 ZNF143 GTRD no Epithelial (MCF-7) 108366442
chr19 3387450 3388454 ZBTB33 GTRD no Lung (A549) 21839150
chr19 3387450 3388454 ZBTB33 GTRD no Lung (A549) 108366443
chr19 3387460 3389114 TCF7L2 GTRD no Colon (HCT116) 21839151
chr19 3387460 3389114 TCF7L2 GTRD no Colon (HCT116) 108366444
chr19 3387486 3388588 ZBTB33 GTRD no Brain (SK-N-SH) 21839152
chr19 3387486 3388588 ZBTB33 GTRD no Brain (SK-N-SH) 108366445
chr19 3387488 3388275 ZNF143 GTRD no Epithelial (MCF-7) 21839153
chr19 3387488 3388275 ZNF143 GTRD no Epithelial (MCF-7) 108366446
chr19 3387490 3388349 ZNF143 GTRD no Epithelial (MCF-7) 21839154
chr19 3387490 3388349 ZNF143 GTRD no Epithelial (MCF-7) 108366447
chr19 3387496 3388267 TCF7L2 GTRD no Colon (HCT116) 21839156
chr19 3387496 3388267 TCF7L2 GTRD no Colon (HCT116) 108366449
chr19 3387498 3389063 TCF7L2 GTRD no Colon (HCT116) 21839157
chr19 3387498 3389063 TCF7L2 GTRD no Colon (HCT116) 108366450
chr19 3387500 3388411 ZNF143 GTRD no Epithelial (MCF-7) 21839158
chr19 3387500 3388411 ZNF143 GTRD no Epithelial (MCF-7) 108366451
chr19 3387509 3388432 TCF7L2 GTRD no Colon (HCT116) 21839159
chr19 3387509 3388432 TCF7L2 GTRD no Colon (HCT116) 108366452
chr19 3387512 3388471 ZBTB33 GTRD no Brain (SK-N-SH) 21839161
chr19 3387512 3388471 ZBTB33 GTRD no Brain (SK-N-SH) 108366454
chr19 3387517 3388304 ZNF143 GTRD no Epithelial (MCF-7) 21839162
chr19 3387517 3388304 ZNF143 GTRD no Epithelial (MCF-7) 108366455
chr19 3387519 3388497 ZBTB33 GTRD no Brain (SK-N-SH) 21839163
chr19 3387519 3388497 ZBTB33 GTRD no Brain (SK-N-SH) 108366456
chr19 3387520 3388313 ZNF143 GTRD no Epithelial (MCF-7) 21839164
chr19 3387520 3388313 ZNF143 GTRD no Epithelial (MCF-7) 108366457
chr19 3387521 3388322 ZBTB33 GTRD no Brain (SK-N-SH) 21839165
chr19 3387521 3388322 ZBTB33 GTRD no Brain (SK-N-SH) 108366458
chr19 3387525 3388396 ZNF274 GTRD no Cervix (HeLa-S3) 21839166
chr19 3387525 3388396 ZNF274 GTRD no Cervix (HeLa-S3) 108366459
chr19 3387526 3388285 ZNF274 GTRD no Cervix (HeLa-S3) 21839167
chr19 3387526 3388285 ZNF274 GTRD no Cervix (HeLa-S3) 108366460
chr19 3387530 3388349 ZNF274 GTRD no Cervix (HeLa-S3) 21839168
chr19 3387530 3388349 ZNF274 GTRD no Cervix (HeLa-S3) 108366461
chr19 3387532 3388460 ZNF143 GTRD no Epithelial (MCF-7) 21839169
chr19 3387532 3388460 ZNF143 GTRD no Epithelial (MCF-7) 108366462
chr19 3387532 3388593 ZBTB33 GTRD no Brain (SK-N-SH) 21839170
chr19 3387532 3388593 ZBTB33 GTRD no Brain (SK-N-SH) 108366463
chr19 3387534 3388406 ZNF143 GTRD no Epithelial (MCF-7) 21839171
chr19 3387534 3388406 ZNF143 GTRD no Epithelial (MCF-7) 108366464
chr19 3387534 3388633 ZBTB33 GTRD no Lung (A549) 21839172
chr19 3387534 3388633 ZBTB33 GTRD no Lung (A549) 108366465
chr19 3387538 3388585 ZBTB33 GTRD no Brain (SK-N-SH) 21839173
chr19 3387538 3388585 ZBTB33 GTRD no Brain (SK-N-SH) 108366466
chr19 3387541 3388267 ZBTB33 GTRD no Brain (SK-N-SH) 21839174
chr19 3387541 3388267 ZBTB33 GTRD no Brain (SK-N-SH) 108366467
chr19 3387543 3388334 ZNF143 GTRD no Epithelial (MCF-7) 21839175
chr19 3387543 3388334 ZNF143 GTRD no Epithelial (MCF-7) 108366468
chr19 3387546 3388274 ZBTB33 GTRD no Lung (A549) 21839176
chr19 3387546 3388274 ZBTB33 GTRD no Lung (A549) 108366469
chr19 3387548 3388561 ZBTB33 GTRD no Lung (A549) 21839177
chr19 3387548 3388561 ZBTB33 GTRD no Lung (A549) 108366470
chr19 3387554 3388279 TCF7L2 GTRD no Colon (HCT116) 21839178
chr19 3387554 3388279 TCF7L2 GTRD no Colon (HCT116) 108366471
chr19 3387555 3388331 ZNF143 GTRD no Epithelial (MCF-7) 21839179
chr19 3387555 3388331 ZNF143 GTRD no Epithelial (MCF-7) 108366472
chr19 3387556 3388372 P63 GTRD no Skin (Keratinocyte) 21839180
chr19 3387556 3388372 P63 GTRD no Skin (Keratinocyte) 108366473
chr19 3387557 3390833 ZNF274 GTRD no Cervix (HeLa-S3) 21839181
chr19 3387557 3390833 ZNF274 GTRD no Cervix (HeLa-S3) 108366474
chr19 3387565 3388309 ZNF143 GTRD no Epithelial (MCF-7) 21839184
chr19 3387565 3388309 ZNF143 GTRD no Epithelial (MCF-7) 108366477
chr19 3387577 3388420 ZNF274 GTRD no Cervix (HeLa-S3) 21839185
chr19 3387577 3388420 ZNF274 GTRD no Cervix (HeLa-S3) 108366478
chr19 3387579 3388377 ZNF143 GTRD no Epithelial (MCF-7) 21839187
chr19 3387579 3388377 ZNF143 GTRD no Epithelial (MCF-7) 108366480
chr19 3387586 3388441 ZNF143 GTRD no Epithelial (MCF-7) 21839188
chr19 3387586 3388441 ZNF143 GTRD no Epithelial (MCF-7) 108366481
chr19 3387592 3388479 ZNF143 GTRD no Epithelial (MCF-7) 21839189
chr19 3387592 3388479 ZNF143 GTRD no Epithelial (MCF-7) 108366482
chr19 3387592 3388492 ZBTB33 GTRD no Brain (SK-N-SH) 21839190
chr19 3387592 3388492 ZBTB33 GTRD no Brain (SK-N-SH) 108366483
chr19 3387595 3388450 TCF7L2 GTRD no Colon (HCT116) 21839191
chr19 3387595 3388450 TCF7L2 GTRD no Colon (HCT116) 108366484
chr19 3387597 3388403 ZNF143 GTRD no Epithelial (MCF-7) 21839192
chr19 3387597 3388403 ZNF143 GTRD no Epithelial (MCF-7) 108366485
chr19 3387603 3388264 ZNF143 GTRD no Epithelial (MCF-7) 21839194
chr19 3387603 3388264 ZNF143 GTRD no Epithelial (MCF-7) 108366487
chr19 3387606 3388262 ZNF274 GTRD no Cervix (HeLa-S3) 21839196
chr19 3387606 3388262 ZNF274 GTRD no Cervix (HeLa-S3) 108366489
chr19 3387610 3388264 ZNF143 GTRD no Epithelial (MCF-7) 21839197
chr19 3387610 3388264 ZNF143 GTRD no Epithelial (MCF-7) 108366490
chr19 3387611 3388328 ZBTB33 GTRD no Lung (A549) 21839198
chr19 3387611 3388328 ZBTB33 GTRD no Lung (A549) 108366491
chr19 3387615 3388375 ZBTB33 GTRD no Brain (SK-N-SH) 21839199
chr19 3387615 3388375 ZBTB33 GTRD no Brain (SK-N-SH) 108366492
chr19 3387623 3388304 ZNF143 GTRD no Epithelial (MCF-7) 21839202
chr19 3387623 3388304 ZNF143 GTRD no Epithelial (MCF-7) 108366495
chr19 3387623 3388415 ZBTB33 GTRD no Brain (SK-N-SH) 21839203
chr19 3387623 3388415 ZBTB33 GTRD no Brain (SK-N-SH) 108366496
chr19 3387627 3388254 ZNF274 GTRD no Cervix (HeLa-S3) 21839205
chr19 3387627 3388254 ZNF274 GTRD no Cervix (HeLa-S3) 108366498
chr19 3387628 3388419 ZBTB33 GTRD no Brain (SK-N-SH) 21839206
chr19 3387628 3388419 ZBTB33 GTRD no Brain (SK-N-SH) 108366499
chr19 3387647 3388256 ZBTB33 GTRD no Brain (SK-N-SH) 21839207
chr19 3387647 3388256 ZBTB33 GTRD no Brain (SK-N-SH) 108366500
chr19 3387651 3388325 ZBTB33 GTRD no Brain (SK-N-SH) 21839209
chr19 3387651 3388325 ZBTB33 GTRD no Brain (SK-N-SH) 108366502
chr19 3387659 3388328 ZNF274 GTRD no Blood (GM12878) 21839211
chr19 3387659 3388328 ZNF274 GTRD no Blood (GM12878) 108366504
chr19 3387665 3388322 TCF7L2 GTRD no Colon (HCT116) 21839214
chr19 3387665 3388322 TCF7L2 GTRD no Colon (HCT116) 108366507
chr19 3387666 3388349 ZNF143 GTRD no Epithelial (MCF-7) 21839215
chr19 3387666 3388349 ZNF143 GTRD no Epithelial (MCF-7) 108366508
chr19 3387671 3388247 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21839216
chr19 3387671 3388247 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108366509
chr19 3387676 3388422 ZNF274 GTRD no Cervix (HeLa-S3) 21839218
chr19 3387676 3388422 ZNF274 GTRD no Cervix (HeLa-S3) 108366511
chr19 3387692 3388360 ZNF143 GTRD no Epithelial (MCF-7) 21839224
chr19 3387692 3388360 ZNF143 GTRD no Epithelial (MCF-7) 108366517
chr19 3387693 3388382 ZNF143 GTRD no Epithelial (MCF-7) 21839225
chr19 3387693 3388382 ZNF143 GTRD no Epithelial (MCF-7) 108366518
chr19 3387698 3388381 ZBTB33 GTRD no Lung (A549) 21839226
chr19 3387698 3388381 ZBTB33 GTRD no Lung (A549) 108366519
chr19 3387722 3388673 ZBTB33 GTRD no Lung (A549) 21839230
chr19 3387722 3388673 ZBTB33 GTRD no Lung (A549) 108366524
chr19 3387725 3388266 ZBTB33 GTRD no Lung (A549) 21839231
chr19 3387725 3388266 ZBTB33 GTRD no Lung (A549) 108366525
chr19 3387734 3388352 ZBTB33 GTRD no Lung (A549) 21839233
chr19 3387734 3388352 ZBTB33 GTRD no Lung (A549) 108366528
chr19 3387741 3388402 ZBTB33 GTRD no Brain (SK-N-SH) 21839234
chr19 3387741 3388402 ZBTB33 GTRD no Brain (SK-N-SH) 108366529
chr19 3387747 3388458 ZNF274 GTRD no Bone Marrow (K562) 21839236
chr19 3387747 3388458 ZNF274 GTRD no Bone Marrow (K562) 108366531
chr19 3387750 3388328 MYOD GTRD no Muscle (Myoblast) 21839237
chr19 3387750 3388328 MYOD GTRD no Muscle (Myoblast) 108366532
chr19 3387764 3388379 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21839238
chr19 3387764 3388379 E2F1 UCSC Txn Factor no Conserved 108366533
chr19 3387764 3388379 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108366534
chr19 3387782 3388442 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21839239
chr19 3387782 3388442 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108366535
chr19 3387800 3388412 ZNF274 GTRD no Bone Marrow (K562) 21839241
chr19 3387800 3388412 ZNF274 GTRD no Bone Marrow (K562) 108366537
chr19 3387820 3388264 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21839243
chr19 3387820 3388264 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108366539
chr19 3387825 3388335 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21839244
chr19 3387825 3388335 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108366540
chr19 3387825 3388670 ZNF274 GTRD no Blood (GM12878) 21839245
chr19 3387825 3388670 ZNF274 GTRD no Blood (GM12878) 108366541
chr19 3387850 3388306 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21839246
chr19 3387850 3388306 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108366542
chr19 3387868 3388332 ZNF274 GTRD no Cervix (HeLa-S3) 21839248
chr19 3387868 3388332 ZNF274 GTRD no Cervix (HeLa-S3) 108366544
chr19 3387884 3388444 ZBTB33 GTRD no Brain (SK-N-SH) 21839249
chr19 3387884 3388444 ZBTB33 GTRD no Brain (SK-N-SH) 108366545
chr19 3387964 3388267 ZNF274 GTRD no Bone Marrow (K562) 21839253
chr19 3387964 3388267 ZNF274 GTRD no Bone Marrow (K562) 108366549
chr19 3388018 3388783 ZNF274 GTRD no Bone Marrow (K562) 21839254
chr19 3388018 3388783 ZNF274 GTRD no Bone Marrow (K562) 108366550
chr19 3388032 3388610 ZNF274 GTRD no Liver (HepG2) 21839255
chr19 3388032 3388610 ZNF274 GTRD no Liver (HepG2) 108366551
chr19 3388099 3389424 ZNF274 GTRD no Bone Marrow (K562) 21839256
chr19 3388099 3389424 ZNF274 GTRD no Bone Marrow (K562) 108366552
chr19 3388101 3388576 ZNF274 GTRD no Liver (HepG2) 21839257
chr19 3388101 3388576 ZNF274 GTRD no Liver (HepG2) 108366553
chr19 3388238 3388249 NFKB1 JASPAR yes 112126874
chr19 3388238 3388251 NFKB1 JASPAR yes 112126875
chr19 3388238 3388251 NFKB2 JASPAR yes 112126876
chr19 3388239 3388249 NFKB1 JASPAR yes 112126877
chr19 3388239 3388249 REL JASPAR yes 112126878
chr19 3388239 3388250 NFKB1 JASPAR yes 112126879
chr19 3388239 3388252 NFKB1 JASPAR yes 112126880
chr19 3388239 3388252 NFKB2 JASPAR yes 112126881
chr19 3388240 3388250 NFKB1 JASPAR yes 112126882
chr19 3388240 3388250 RELA JASPAR yes 112126883
chr19 3388240 3388251 NFKB1 JASPAR yes 112126884
chr19 3388246 3388252 MZF1 JASPAR yes 112126885
Genes associated with rs10403546[chr19:3388246], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More