EnhancerDB
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Enhancers that have rs10406272[chr19:2495724]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2481141 2509475 enh4958
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs10406272[chr19:2495724]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2493553 2496728 ZNF274 GTRD no Cervix (HeLa-S3) 21835645
chr19 2493553 2496728 ZNF274 GTRD no Cervix (HeLa-S3) 108360457
chr19 2493553 2496728 ZNF274 GTRD no Cervix (HeLa-S3) 108360458
chr19 2493689 2495889 ZBTB33 GTRD no Lung (A549) 108360461
chr19 2493689 2495889 ZBTB33 GTRD no Lung (A549) 108360462
chr19 2493877 2496024 TCF7L2 GTRD no Colon (HCT116) 108360464
chr19 2493877 2496024 TCF7L2 GTRD no Colon (HCT116) 108360465
chr19 2493902 2496299 TCF7L2 GTRD no Colon (HCT116) 108360468
chr19 2493902 2496299 TCF7L2 GTRD no Colon (HCT116) 108360469
chr19 2493915 2496279 TCF7L2 GTRD no Colon (HCT116) 108360470
chr19 2493915 2496279 TCF7L2 GTRD no Colon (HCT116) 108360471
chr19 2493933 2495825 ZBTB33 GTRD no Lung (A549) 108360472
chr19 2493933 2495825 ZBTB33 GTRD no Lung (A549) 108360473
chr19 2493953 2496192 TCF7L2 GTRD no Colon (HCT116) 108360475
chr19 2493953 2496192 TCF7L2 GTRD no Colon (HCT116) 108360476
chr19 2493968 2496356 TCF7L2 GTRD no Colon (HCT116) 108360477
chr19 2493968 2496356 TCF7L2 GTRD no Colon (HCT116) 108360478
chr19 2493992 2496814 ZNF274 GTRD no Blood (GM12878) 108360482
chr19 2493992 2496814 ZNF274 GTRD no Blood (GM12878) 108360483
chr19 2494032 2496113 TCF7L2 GTRD no Colon (HCT116) 108360485
chr19 2494032 2496113 TCF7L2 GTRD no Colon (HCT116) 108360486
chr19 2494088 2496193 ZNF143 GTRD no Epithelial (MCF-7) 21835654
chr19 2494088 2496193 ZNF143 GTRD no Epithelial (MCF-7) 108360495
chr19 2494088 2496193 ZNF143 GTRD no Epithelial (MCF-7) 108360496
chr19 2494094 2496160 ZBTB33 GTRD no Brain (SK-N-SH) 108360498
chr19 2494094 2496160 ZBTB33 GTRD no Brain (SK-N-SH) 108360499
chr19 2494233 2495767 ZNF143 GTRD no Epithelial (MCF-7) 21835661
chr19 2494233 2495767 ZNF143 GTRD no Epithelial (MCF-7) 108360513
chr19 2494251 2495778 ZNF274 GTRD no Blood (GM12878) 108360514
chr19 2494254 2495863 TCF7L2 GTRD no Colon (HCT116) 108360515
chr19 2494254 2495863 TCF7L2 GTRD no Colon (HCT116) 108360516
chr19 2494296 2495740 ZNF274 GTRD no Cervix (HeLa-S3) 21835665
chr19 2494296 2495740 ZNF274 GTRD no Cervix (HeLa-S3) 108360520
chr19 2494415 2495775 ZNF274 GTRD no Bone Marrow (K562) 21835673
chr19 2494415 2495775 ZNF274 GTRD no Bone Marrow (K562) 108360536
chr19 2494425 2495877 ZNF143 GTRD no Epithelial (MCF-7) 21835677
chr19 2494425 2495877 ZNF143 GTRD no Epithelial (MCF-7) 108360542
chr19 2494425 2495877 ZNF143 GTRD no Epithelial (MCF-7) 108360543
chr19 2494432 2495882 TCF7L2 GTRD no Colon (HCT116) 108360545
chr19 2494432 2495882 TCF7L2 GTRD no Colon (HCT116) 108360546
chr19 2494450 2496024 ZBTB33 GTRD no Brain (SK-N-SH) 108360552
chr19 2494450 2496024 ZBTB33 GTRD no Brain (SK-N-SH) 108360553
chr19 2494474 2495974 ZNF274 GTRD no Blood (GM12878) 108360557
chr19 2494474 2495974 ZNF274 GTRD no Blood (GM12878) 108360558
chr19 2494492 2496222 TCF7L2 GTRD no Colon (HCT116) 108360562
chr19 2494492 2496222 TCF7L2 GTRD no Colon (HCT116) 108360563
chr19 2494495 2495727 ZNF274 GTRD no Bone Marrow (K562) 21835684
chr19 2494495 2495727 ZNF274 GTRD no Bone Marrow (K562) 108360564
chr19 2494533 2495764 ZNF143 GTRD no Epithelial (MCF-7) 21835686
chr19 2494533 2495764 ZNF143 GTRD no Epithelial (MCF-7) 108360569
chr19 2494609 2495867 ZNF274 GTRD no Bone Marrow (K562) 21835691
chr19 2494609 2495867 ZNF274 GTRD no Bone Marrow (K562) 108360578
chr19 2494609 2495867 ZNF274 GTRD no Bone Marrow (K562) 108360579
chr19 2494746 2496306 ZNF274 GTRD no Cervix (HeLa-S3) 21835702
chr19 2494746 2496306 ZNF274 GTRD no Cervix (HeLa-S3) 108360595
chr19 2494746 2496306 ZNF274 GTRD no Cervix (HeLa-S3) 108360596
chr19 2494749 2496165 ZNF274 GTRD no Cervix (HeLa-S3) 21835703
chr19 2494749 2496165 ZNF274 GTRD no Cervix (HeLa-S3) 108360597
chr19 2494749 2496165 ZNF274 GTRD no Cervix (HeLa-S3) 108360598
chr19 2494767 2495930 ZBTB33 GTRD no Brain (SK-N-SH) 108360602
chr19 2494767 2495930 ZBTB33 GTRD no Brain (SK-N-SH) 108360603
chr19 2495108 2495891 ZNF274 GTRD no Blood (GM12878) 108360640
chr19 2495108 2495891 ZNF274 GTRD no Blood (GM12878) 108360641
chr19 2495208 2496803 TCF7L2 GTRD no Colon (HCT116) 108360642
chr19 2495281 2496448 ZNF274 GTRD no Bone Marrow (K562) 21835736
chr19 2495281 2496448 ZNF274 GTRD no Bone Marrow (K562) 108360643
chr19 2495326 2496424 ZNF143 GTRD no Epithelial (MCF-7) 21835739
chr19 2495326 2496424 ZNF143 GTRD no Epithelial (MCF-7) 108360644
chr19 2495334 2496583 ZNF143 GTRD no Epithelial (MCF-7) 21835740
chr19 2495334 2496583 ZNF143 GTRD no Epithelial (MCF-7) 108360645
chr19 2495530 2496195 TCF7L2 GTRD no Colon (HCT116) 108360646
chr19 2495612 2496478 ZNF143 GTRD no Epithelial (MCF-7) 21835742
chr19 2495612 2496478 ZNF143 GTRD no Epithelial (MCF-7) 108360647
chr19 2495656 2496433 ZNF143 GTRD no Epithelial (MCF-7) 21835743
chr19 2495656 2496433 ZNF143 GTRD no Epithelial (MCF-7) 108360648
chr19 2495684 2496645 ZNF143 GTRD no Epithelial (MCF-7) 21835744
chr19 2495684 2496645 ZNF143 GTRD no Epithelial (MCF-7) 108360649
chr19 2495686 2496523 TCF7L2 GTRD no Colon (HCT116) 108360650
chr19 2495692 2496320 ZNF274 GTRD no Bone Marrow (K562) 21835745
chr19 2495692 2496320 ZNF274 GTRD no Bone Marrow (K562) 108360651
chr19 2495696 2496363 ZNF143 GTRD no Epithelial (MCF-7) 21835746
chr19 2495696 2496363 ZNF143 GTRD no Epithelial (MCF-7) 108360652
chr19 2495698 2496417 ZNF274 GTRD no Bone Marrow (K562) 21835747
chr19 2495698 2496417 ZNF274 GTRD no Bone Marrow (K562) 108360653
chr19 2495703 2495724 ZNF263 JASPAR yes 112066567
chr19 2495715 2495725 ZNF740 JASPAR yes 112066572
chr19 2495716 2495726 ZNF740 JASPAR yes 112066573
Genes associated with rs10406272[chr19:2495724], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More