EnhancerDB
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  3. rs10406711[chr19:2495950]
Enhancers that have rs10406711[chr19:2495950]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2481141 2509475 enh4958
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs10406711[chr19:2495950]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2493553 2496728 ZNF274 GTRD no Cervix (HeLa-S3) 21835645
chr19 2493553 2496728 ZNF274 GTRD no Cervix (HeLa-S3) 108360457
chr19 2493553 2496728 ZNF274 GTRD no Cervix (HeLa-S3) 108360458
chr19 2493877 2496024 TCF7L2 GTRD no Colon (HCT116) 108360464
chr19 2493877 2496024 TCF7L2 GTRD no Colon (HCT116) 108360465
chr19 2493902 2496299 TCF7L2 GTRD no Colon (HCT116) 108360468
chr19 2493902 2496299 TCF7L2 GTRD no Colon (HCT116) 108360469
chr19 2493915 2496279 TCF7L2 GTRD no Colon (HCT116) 108360470
chr19 2493915 2496279 TCF7L2 GTRD no Colon (HCT116) 108360471
chr19 2493953 2496192 TCF7L2 GTRD no Colon (HCT116) 108360475
chr19 2493953 2496192 TCF7L2 GTRD no Colon (HCT116) 108360476
chr19 2493968 2496356 TCF7L2 GTRD no Colon (HCT116) 108360477
chr19 2493968 2496356 TCF7L2 GTRD no Colon (HCT116) 108360478
chr19 2493992 2496814 ZNF274 GTRD no Blood (GM12878) 108360482
chr19 2493992 2496814 ZNF274 GTRD no Blood (GM12878) 108360483
chr19 2494032 2496113 TCF7L2 GTRD no Colon (HCT116) 108360485
chr19 2494032 2496113 TCF7L2 GTRD no Colon (HCT116) 108360486
chr19 2494088 2496193 ZNF143 GTRD no Epithelial (MCF-7) 21835654
chr19 2494088 2496193 ZNF143 GTRD no Epithelial (MCF-7) 108360495
chr19 2494088 2496193 ZNF143 GTRD no Epithelial (MCF-7) 108360496
chr19 2494094 2496160 ZBTB33 GTRD no Brain (SK-N-SH) 108360498
chr19 2494094 2496160 ZBTB33 GTRD no Brain (SK-N-SH) 108360499
chr19 2494450 2496024 ZBTB33 GTRD no Brain (SK-N-SH) 108360552
chr19 2494450 2496024 ZBTB33 GTRD no Brain (SK-N-SH) 108360553
chr19 2494474 2495974 ZNF274 GTRD no Blood (GM12878) 108360557
chr19 2494474 2495974 ZNF274 GTRD no Blood (GM12878) 108360558
chr19 2494492 2496222 TCF7L2 GTRD no Colon (HCT116) 108360562
chr19 2494492 2496222 TCF7L2 GTRD no Colon (HCT116) 108360563
chr19 2494746 2496306 ZNF274 GTRD no Cervix (HeLa-S3) 21835702
chr19 2494746 2496306 ZNF274 GTRD no Cervix (HeLa-S3) 108360595
chr19 2494746 2496306 ZNF274 GTRD no Cervix (HeLa-S3) 108360596
chr19 2494749 2496165 ZNF274 GTRD no Cervix (HeLa-S3) 21835703
chr19 2494749 2496165 ZNF274 GTRD no Cervix (HeLa-S3) 108360597
chr19 2494749 2496165 ZNF274 GTRD no Cervix (HeLa-S3) 108360598
chr19 2495208 2496803 TCF7L2 GTRD no Colon (HCT116) 108360642
chr19 2495281 2496448 ZNF274 GTRD no Bone Marrow (K562) 21835736
chr19 2495281 2496448 ZNF274 GTRD no Bone Marrow (K562) 108360643
chr19 2495326 2496424 ZNF143 GTRD no Epithelial (MCF-7) 21835739
chr19 2495326 2496424 ZNF143 GTRD no Epithelial (MCF-7) 108360644
chr19 2495334 2496583 ZNF143 GTRD no Epithelial (MCF-7) 21835740
chr19 2495334 2496583 ZNF143 GTRD no Epithelial (MCF-7) 108360645
chr19 2495530 2496195 TCF7L2 GTRD no Colon (HCT116) 108360646
chr19 2495612 2496478 ZNF143 GTRD no Epithelial (MCF-7) 21835742
chr19 2495612 2496478 ZNF143 GTRD no Epithelial (MCF-7) 108360647
chr19 2495656 2496433 ZNF143 GTRD no Epithelial (MCF-7) 21835743
chr19 2495656 2496433 ZNF143 GTRD no Epithelial (MCF-7) 108360648
chr19 2495684 2496645 ZNF143 GTRD no Epithelial (MCF-7) 21835744
chr19 2495684 2496645 ZNF143 GTRD no Epithelial (MCF-7) 108360649
chr19 2495686 2496523 TCF7L2 GTRD no Colon (HCT116) 108360650
chr19 2495692 2496320 ZNF274 GTRD no Bone Marrow (K562) 21835745
chr19 2495692 2496320 ZNF274 GTRD no Bone Marrow (K562) 108360651
chr19 2495696 2496363 ZNF143 GTRD no Epithelial (MCF-7) 21835746
chr19 2495696 2496363 ZNF143 GTRD no Epithelial (MCF-7) 108360652
chr19 2495698 2496417 ZNF274 GTRD no Bone Marrow (K562) 21835747
chr19 2495698 2496417 ZNF274 GTRD no Bone Marrow (K562) 108360653
chr19 2495742 2496608 ZNF143 GTRD no Epithelial (MCF-7) 21835748
chr19 2495742 2496608 ZNF143 GTRD no Epithelial (MCF-7) 108360654
chr19 2495795 2496327 ZNF143 GTRD no Epithelial (MCF-7) 21835749
chr19 2495795 2496327 ZNF143 GTRD no Epithelial (MCF-7) 108360655
chr19 2495811 2496379 ZNF143 GTRD no Epithelial (MCF-7) 21835750
chr19 2495811 2496379 ZNF143 GTRD no Epithelial (MCF-7) 108360656
chr19 2495816 2496460 ZNF274 GTRD no Liver (HepG2) 21835751
chr19 2495816 2496460 ZNF274 GTRD no Liver (HepG2) 108360657
chr19 2495818 2496483 ZBTB33 GTRD no Lung (A549) 108360658
chr19 2495821 2496460 ZNF274 GTRD no Liver (HepG2) 21835752
chr19 2495821 2496460 ZNF274 GTRD no Liver (HepG2) 108360659
chr19 2495839 2496369 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835753
chr19 2495839 2496369 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108360660
chr19 2495841 2496369 ZNF143 GTRD no Epithelial (MCF-7) 21835754
chr19 2495841 2496369 ZNF143 GTRD no Epithelial (MCF-7) 108360661
chr19 2495843 2496359 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835755
chr19 2495843 2496359 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108360662
chr19 2495902 2496444 ZNF274 GTRD no Cervix (HeLa-S3) 21835756
chr19 2495902 2496444 ZNF274 GTRD no Cervix (HeLa-S3) 108360663
chr19 2495923 2496607 ZBTB33 GTRD no Lung (A549) 108360664
chr19 2495946 2495952 SP1 TRANSFAC yes 112066609
chr19 2495947 2495952 SP1 TRANSFAC yes 112066610
Genes associated with rs10406711[chr19:2495950], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More