EnhancerDB
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  3. rs10409371[chr19:7482890]
Enhancers that have rs10409371[chr19:7482890]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 7469445 7495915 enh17893
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs10409371[chr19:7482890]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 7481922 7484097 TCF7L2 GTRD no Colon (HCT116) 21846565
chr19 7481922 7484097 TCF7L2 GTRD no Colon (HCT116) 108381174
chr19 7482027 7484385 ZNF274 GTRD no Bone Marrow (K562) 108381175
chr19 7482469 7483762 TCF7L2 GTRD no Colon (HCT116) 21846566
chr19 7482469 7483762 TCF7L2 GTRD no Colon (HCT116) 108381176
chr19 7482513 7483896 TCF7L2 GTRD no Colon (HCT116) 21846567
chr19 7482513 7483896 TCF7L2 GTRD no Colon (HCT116) 108381177
chr19 7482543 7484127 TCF7L2 GTRD no Colon (HCT116) 21846568
chr19 7482543 7484127 TCF7L2 GTRD no Colon (HCT116) 108381178
chr19 7482563 7484061 TCF7L2 GTRD no Colon (HCT116) 21846569
chr19 7482563 7484061 TCF7L2 GTRD no Colon (HCT116) 108381179
chr19 7482742 7484100 ZNF274 GTRD no Bone Marrow (K562) 108381180
chr19 7482872 7484379 ZNF274 GTRD no Cervix (HeLa-S3) 21846570
chr19 7482872 7484379 ZNF274 GTRD no Cervix (HeLa-S3) 108381181
chr19 7482876 7482895 PAX5 JASPAR yes 112326328
Genes associated with rs10409371[chr19:7482890], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More