EnhancerDB
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  3. rs10445189[chr16:88342431]
Enhancers that have rs10445189[chr16:88342431]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88327201 88357367 enh16902
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus
Transcript factors that have rs10445189[chr16:88342431]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88338138 88343321 ZNF143 GTRD no Epithelial (MCF-7) 108221932
chr16 88338138 88343321 ZNF143 GTRD no Epithelial (MCF-7) 108221933
chr16 88339563 88343230 TCF7L2 GTRD no Colon (HCT116) 108221946
chr16 88340421 88343363 TCF7L2 GTRD no Colon (HCT116) 108221956
Genes associated with rs10445189[chr16:88342431], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 88922628 88929094 + TRAPPC2L ENSG00000167515.6 88922628 580197 Liver 0.431852 15167