EnhancerDB
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  3. rs10489286[chr1:172312919]
Enhancers that have rs10489286[chr1:172312919]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172309865 172315243 enh27239
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Thyroid Muscle (Myoblast) Uterus Blood (T-cell) Stomach
chr1 172312870 172313163 vista3882
VISTA
Transcript factors that have rs10489286[chr1:172312919]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172312393 172313105 ZBTB33 GTRD no Brain (SK-N-SH) 107845570
chr1 172312462 172312982 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845571
chr1 172312499 172313128 ZBTB33 GTRD no Brain (SK-N-SH) 107845572
chr1 172312550 172313200 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349825
chr1 172312550 172313200 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845574
chr1 172312736 172313120 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845577
chr1 172312784 172313434 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349826
chr1 172312784 172313434 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845578
chr1 172312869 172313279 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107845579
chr1 172312906 172312919 NFKB1 JASPAR yes 33123895
chr1 172312906 172312919 NFKB2 JASPAR yes 33123896
chr1 172312906 172312919 NFKB1 JASPAR yes 118398503
chr1 172312906 172312919 NFKB2 JASPAR yes 118398504
chr1 172312908 172312919 NFKB1 JASPAR yes 33123903
chr1 172312908 172312919 NFKB1 JASPAR yes 118398511
chr1 172312911 172312919 FEV JASPAR yes 33123905
chr1 172312911 172312919 FEV JASPAR yes 118398513
chr1 172312912 172312923 STAT1 JASPAR yes 33123906
chr1 172312912 172312923 STAT1 JASPAR yes 118398514
Genes associated with rs10489286[chr1:172312919], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More