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- SNP
- rs10506[chr19:863356]
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
858228 |
870935 |
enh86290 |
|
|
Transcript factors that have rs10506[chr19:863356]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
861344
|
864664
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21830142
|
|
|
chr19
|
861344
|
864664
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108347099
|
|
|
chr19
|
861464
|
864440
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108347100
|
|
|
chr19
|
861598
|
864625
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108347101
|
|
|
chr19
|
861760
|
864554
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108347102
|
|
|
chr19
|
862099
|
864541
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108347103
|
|
|
chr19
|
862383
|
864623
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108347104
|
|
|
chr19
|
862453
|
864622
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108347105
|
|
|
chr19
|
862539
|
866536
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
108347106
|
|
|
chr19
|
863346
|
863367
|
ZNF263
|
JASPAR
|
yes
|
|
111979892
|
|
|
chr19
|
863350
|
863364
|
PLAG1
|
JASPAR
|
yes
|
|
111979893
|
|
|
chr19
|
863356
|
863374
|
RARA
|
JASPAR
|
yes
|
|
111979894
|
|
Genes associated with rs10506[chr19:863356], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr19
|
867962
|
893218
|
-
|
MED16
|
ENSG00000175221.10
|
893218
|
4606
|
Adrenal
|
0.24976
|
16722
|
|