EnhancerDB
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  3. rs10528654[chr16:88263244]
Enhancers that have rs10528654[chr16:88263244]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs10528654[chr16:88263244]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88262812 88264212 TCF7L2 GTRD no Colon (HCT116) 21735441
chr16 88262863 88265383 TCF7L2 GTRD no Colon (HCT116) 21735442
chr16 88262956 88263693 TCF7L2 GTRD no Colon (HCT116) 21735443
chr16 88263008 88263472 ZNF143 GTRD no Epithelial (MCF-7) 21735444
chr16 88263096 88263336 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21735445
chr16 88263236 88263246 MAX JASPAR yes 12268123
chr16 88263236 88263247 USF1 JASPAR yes 12268124
chr16 88263236 88263247 USF2 JASPAR yes 12268125
chr16 88263237 88263247 BHLHE40 JASPAR yes 12268126
chr16 88263237 88263247 BHLHE41 JASPAR yes 12268127
chr16 88263237 88263247 HEY1 JASPAR yes 12268128
chr16 88263237 88263247 HEY2 JASPAR yes 12268129
chr16 88263237 88263247 MAX JASPAR yes 12268130
chr16 88263237 88263247 MLXIPL JASPAR yes 12268131
chr16 88263237 88263247 MNT JASPAR yes 12268132
chr16 88263237 88263247 SREBF2 JASPAR yes 12268133
chr16 88263237 88263247 TFE3 JASPAR yes 12268134
chr16 88263237 88263247 TFEB JASPAR yes 12268135
chr16 88263237 88263247 TFEC JASPAR yes 12268136
chr16 88263238 88263248 MAX JASPAR yes 12268137
chr16 88263239 88263244 MYC TRANSFAC yes 12268138
chr16 88263239 88263244 USF1 TRANSFAC yes 12268139
chr16 88263239 88263244 USF2 TRANSFAC yes 12268140
Genes associated with rs10528654[chr16:88263244], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More