EnhancerDB
  1. Home
  2. SNP
  3. rs10542089[chr12:47706127]
Enhancers that have rs10542089[chr12:47706127]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 47684745 47715015 enh2317
Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs10542089[chr12:47706127]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 47704794 47707293 ZNF274 GTRD no Blood (GM12878) 21543285
chr12 47704833 47707226 ZNF274 GTRD no Blood (GM12878) 21543286
chr12 47704844 47707192 ZNF274 GTRD no Blood (GM12878) 21543287
chr12 47704853 47706497 ZNF143 GTRD no Epithelial (MCF-7) 21543288
chr12 47704854 47706803 ZNF274 GTRD no Blood (GM12878) 21543289
chr12 47704860 47707017 ZNF274 GTRD no Blood (GM12878) 21543290
chr12 47704905 47707265 ZNF274 GTRD no Blood (GM12878) 21543291
chr12 47704942 47706879 ZNF274 GTRD no Blood (GM12878) 21543292
chr12 47704974 47707168 ZNF274 GTRD no Blood (GM12878) 21543293
chr12 47705028 47706950 ZNF274 GTRD no Blood (GM12878) 21543294
chr12 47705099 47706178 ZNF274 GTRD no Blood (GM12878) 21543298
chr12 47705100 47706276 ZNF143 GTRD no Epithelial (MCF-7) 21543299
chr12 47705100 47706308 ZNF143 GTRD no Epithelial (MCF-7) 21543300
chr12 47705121 47706351 ZNF274 GTRD no Blood (GM12878) 21543301
chr12 47705135 47706263 ZNF143 GTRD no Epithelial (MCF-7) 21543302
chr12 47705137 47706999 ZNF274 GTRD no Blood (GM12878) 21543303
chr12 47705143 47707193 ZNF143 GTRD no Epithelial (MCF-7) 21543304
chr12 47705176 47706411 ZNF143 GTRD no Epithelial (MCF-7) 21543305
chr12 47705186 47707250 ZNF143 GTRD no Epithelial (MCF-7) 21543306
chr12 47705188 47706427 ZNF143 GTRD no Epithelial (MCF-7) 21543307
chr12 47705198 47706482 ZNF274 GTRD no Blood (GM12878) 21543308
chr12 47705236 47706336 TCF7L2 GTRD no Colon (HCT116) 21543309
chr12 47705247 47706486 ZNF274 GTRD no Blood (GM12878) 21543310
chr12 47705251 47706495 TCF7L2 GTRD no Colon (HCT116) 21543311
chr12 47705286 47706307 ZNF274 GTRD no Blood (GM12878) 21543313
chr12 47705290 47706488 ZNF274 GTRD no Blood (GM12878) 21543314
chr12 47705294 47706249 TCF7L2 GTRD no Colon (HCT116) 21543315
chr12 47705295 47706834 ZNF143 GTRD no Epithelial (MCF-7) 21543316
chr12 47705299 47706358 TCF7L2 GTRD no Colon (HCT116) 21543317
chr12 47705324 47706165 ZNF143 GTRD no Epithelial (MCF-7) 21543318
chr12 47705342 47706300 ZNF274 GTRD no Blood (GM12878) 21543319
chr12 47705346 47706196 ZNF143 GTRD no Epithelial (MCF-7) 21543321
chr12 47705346 47706200 ZNF274 GTRD no Blood (GM12878) 21543322
chr12 47705348 47706189 TCF7L2 GTRD no Colon (HCT116) 21543323
chr12 47705351 47706171 ZNF143 GTRD no Epithelial (MCF-7) 21543324
chr12 47705354 47706183 TCF7L2 GTRD no Colon (HCT116) 21543325
chr12 47705354 47706324 ZNF143 GTRD no Epithelial (MCF-7) 21543326
chr12 47705356 47706204 ZNF143 GTRD no Epithelial (MCF-7) 21543327
chr12 47705363 47706390 TCF7L2 GTRD no Colon (HCT116) 21543328
chr12 47705371 47706469 TCF7L2 GTRD no Colon (HCT116) 21543329
chr12 47705373 47706376 ZNF143 GTRD no Epithelial (MCF-7) 21543330
chr12 47705378 47706431 ZNF274 GTRD no Blood (GM12878) 21543331
chr12 47705378 47706905 ZNF274 GTRD no Blood (GM12878) 21543332
chr12 47705381 47706557 ZNF143 GTRD no Epithelial (MCF-7) 21543333
chr12 47705383 47706189 TCF7L2 GTRD no Colon (HCT116) 21543334
chr12 47705383 47706270 TCF7L2 GTRD no Colon (HCT116) 21543335
chr12 47705386 47706172 TCF7L2 GTRD no Colon (HCT116) 21543336
chr12 47705394 47706388 ZNF274 GTRD no Blood (GM12878) 21543337
chr12 47705395 47706807 ZNF274 GTRD no Blood (GM12878) 21543338
chr12 47705401 47706184 ZNF143 GTRD no Epithelial (MCF-7) 21543339
chr12 47705402 47706197 ZNF143 GTRD no Epithelial (MCF-7) 21543340
chr12 47705403 47706220 ZNF143 GTRD no Epithelial (MCF-7) 21543341
chr12 47705408 47706293 ZNF274 GTRD no Blood (GM12878) 21543342
chr12 47705411 47706201 ZNF143 GTRD no Epithelial (MCF-7) 21543343
chr12 47705414 47706306 ZNF274 GTRD no Blood (GM12878) 21543344
chr12 47705417 47706329 ZNF274 GTRD no Blood (GM12878) 21543345
chr12 47705424 47706372 ZNF274 GTRD no Blood (GM12878) 21543346
chr12 47705450 47706339 ZNF274 GTRD no Blood (GM12878) 21543347
chr12 47705470 47706257 CTCF GTRD no Spleen 21543348
chr12 47705472 47706210 ZNF274 GTRD no Blood (GM12878) 21543349
chr12 47705486 47706165 ZNF274 GTRD no Blood (GM12878) 21543351
chr12 47705497 47706304 ZNF143 GTRD no Epithelial (MCF-7) 21543352
chr12 47705516 47707058 ZNF274 GTRD no Blood (GM12878) 21543353
chr12 47705520 47706196 TCF7L2 GTRD no Colon (HCT116) 21543354
chr12 47705527 47706296 ZNF274 GTRD no Blood (GM12878) 21543355
chr12 47705529 47706204 ZNF274 GTRD no Blood (GM12878) 21543356
chr12 47705552 47706149 TCF7L2 GTRD no Colon (HCT116) 21543357
chr12 47705560 47706606 ZNF274 GTRD no Blood (GM12878) 21543358
chr12 47705584 47706736 ZNF143 GTRD no Epithelial (MCF-7) 21543359
chr12 47705607 47706559 ZNF274 GTRD no Blood (GM12878) 21543360
chr12 47705644 47706524 ZNF143 GTRD no Epithelial (MCF-7) 21543361
chr12 47705652 47706297 ZNF274 GTRD no Blood (GM12878) 21543362
chr12 47705661 47706242 ZNF274 GTRD no Blood (GM12878) 21543363
chr12 47705667 47706248 ZNF274 GTRD no Blood (GM12878) 21543364
chr12 47705683 47706170 TCF7L2 GTRD no Colon (HCT116) 21543365
chr12 47705689 47706366 ZNF274 GTRD no Blood (GM12878) 21543366
chr12 47705698 47706201 TCF7L2 GTRD no Colon (HCT116) 21543367
chr12 47705728 47706289 ZNF143 GTRD no Epithelial (MCF-7) 21543368
chr12 47705779 47706930 ZNF274 GTRD no Blood (GM12878) 21543369
chr12 47705787 47706377 ZNF274 GTRD no Blood (GM12878) 21543370
chr12 47705792 47706402 ZNF143 GTRD no Epithelial (MCF-7) 21543371
chr12 47705801 47706394 ZNF274 GTRD no Blood (GM12878) 21543372
chr12 47705833 47706994 ZNF274 GTRD no Blood (GM12878) 21543373
chr12 47705847 47706245 ZNF143 GTRD no Epithelial (MCF-7) 21543374
chr12 47705848 47706928 ZNF274 GTRD no Blood (GM12878) 21543375
chr12 47705852 47706702 ZNF274 GTRD no Blood (GM12878) 21543376
chr12 47705863 47706340 ZNF143 GTRD no Epithelial (MCF-7) 21543377
chr12 47705875 47706952 ZNF274 GTRD no Blood (GM12878) 21543378
chr12 47705880 47706498 ZNF143 GTRD no Epithelial (MCF-7) 21543379
chr12 47705889 47707075 ZNF274 GTRD no Blood (GM12878) 21543380
chr12 47705904 47706261 ZNF274 GTRD no Blood (GM12878) 21543381
chr12 47705928 47706933 ZNF274 GTRD no Blood (GM12878) 21543382
chr12 47706052 47706500 ZNF143 GTRD no Epithelial (MCF-7) 21543383
chr12 47706089 47706290 ZNF274 GTRD no Blood (GM12878) 21543384
chr12 47706094 47706555 ZNF143 GTRD no Epithelial (MCF-7) 21543385
chr12 47706120 47706131 CDX2 JASPAR yes 120695815
chr12 47706121 47706132 HOXA10 JASPAR yes 120695816
chr12 47706122 47706131 CDX1 JASPAR yes 120695817
chr12 47706122 47706132 HOXA13 JASPAR yes 120695818
Genes associated with rs10542089[chr12:47706127], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More