EnhancerDB
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  3. rs10552718[chr16:85162954]
Enhancers that have rs10552718[chr16:85162954]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85155669 85199515 enh16863
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs10552718[chr16:85162954]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85161523 85163261 ZNF274 GTRD no Liver (HepG2) 21720013
chr16 85161926 85163214 ZBTB33 GTRD no Brain (SK-N-SH) 21720014
chr16 85162090 85163160 ZBTB33 GTRD no Brain (SK-N-SH) 21720016
chr16 85162168 85163019 ZNF274 GTRD no Liver (HepG2) 21720018
chr16 85162189 85163054 ZBTB33 GTRD no Brain (SK-N-SH) 21720020
chr16 85162192 85163163 ZNF274 GTRD no Liver (HepG2) 21720021
chr16 85162209 85162955 ZBTB33 GTRD no Brain (SK-N-SH) 21720022
chr16 85162209 85163215 ZNF274 GTRD no Liver (HepG2) 21720023
chr16 85162214 85163082 ZBTB33 GTRD no Brain (SK-N-SH) 21720024
chr16 85162225 85162958 ZBTB33 GTRD no Brain (SK-N-SH) 21720026
chr16 85162265 85162981 ZNF143 GTRD no Epithelial (MCF-7) 21720028
chr16 85162266 85162979 ZBTB33 GTRD no Brain (SK-N-SH) 21720029
chr16 85162282 85162966 ZBTB33 GTRD no Brain (SK-N-SH) 21720031
chr16 85162296 85163166 ZNF274 GTRD no Liver (HepG2) 21720032
chr16 85162314 85162963 MYOD GTRD no Muscle (Myoblast) 21720035
chr16 85162335 85163061 ZBTB33 GTRD no Brain (SK-N-SH) 21720036
chr16 85162371 85163143 ZNF274 GTRD no Liver (HepG2) 21720038
chr16 85162409 85163046 ZNF274 GTRD no Liver (HepG2) 21720039
chr16 85162474 85163082 ZNF274 GTRD no Liver (HepG2) 21720041
chr16 85162493 85163107 ZNF274 GTRD no Liver (HepG2) 21720042
chr16 85162607 85163197 ZNF274 GTRD no Liver (HepG2) 21720043
chr16 85162636 85163001 ZNF274 GTRD no Liver (HepG2) 21720044
chr16 85162951 85162966 FOXP1 JASPAR yes 12022394
chr16 85162952 85162967 FOXP1 JASPAR yes 12022395
chr16 85162953 85162968 FOXP1 JASPAR yes 12022396
chr16 85162953 85162974 IRF1 JASPAR yes 12022397
chr16 85162954 85162969 FOXP1 JASPAR yes 12022398
Genes associated with rs10552718[chr16:85162954], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More