EnhancerDB
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Enhancers that have rs10629419[chr17:39707652]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39688905 39708275 enh17150
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs10629419[chr17:39707652]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39707422 39707686 ZNF274 GTRD no Bone Marrow (K562) 21757959
chr17 39707632 39707653 IRF1 JASPAR yes 54264354
chr17 39707637 39707652 FOXP1 JASPAR yes 54264359
chr17 39707638 39707653 FOXP1 JASPAR yes 54264360
chr17 39707638 39707659 IRF1 JASPAR yes 54264361
chr17 39707639 39707654 FOXP1 JASPAR yes 54264362
chr17 39707639 39707660 IRF1 JASPAR yes 54264363
chr17 39707640 39707655 FOXP1 JASPAR yes 54264364
chr17 39707643 39707658 STAT2 JASPAR yes 54264365
Genes associated with rs10629419[chr17:39707652], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More