EnhancerDB
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  3. rs10799454[chr1:228079192]
Enhancers that have rs10799454[chr1:228079192]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228069592 228093895 enh12737
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Blood (T-cell) Lung Stomach Placenta Breast Embryonic Stem Cell Line (H1-hESC) Pancreas Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs10799454[chr1:228079192]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228078399 228080125 ZNF274 GTRD no Bone Marrow (K562) 21388308
chr1 228078399 228080125 ZNF274 GTRD no Bone Marrow (K562) 107876803
chr1 228078835 228080625 ZNF274 GTRD no Bone Marrow (K562) 21388309
chr1 228078835 228080625 ZNF274 GTRD no Bone Marrow (K562) 107876804
chr1 228078932 228080277 ZNF274 GTRD no Blood (GM12878) 107876805
chr1 228079049 228080451 ZNF274 GTRD no Blood (GM12878) 107876806
chr1 228079185 228079195 HOXC10 JASPAR yes 35891280
chr1 228079185 228079195 HOXD11 JASPAR yes 35891281
chr1 228079185 228079196 HOXC11 JASPAR yes 35891282
chr1 228079185 228079196 HOXC12 JASPAR yes 35891283
chr1 228079185 228079196 HOXC13 JASPAR yes 35891284
chr1 228079185 228079196 HOXD12 JASPAR yes 35891285
Genes associated with rs10799454[chr1:228079192], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More