EnhancerDB
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  3. rs10800909[chr1:203240116]
Enhancers that have rs10800909[chr1:203240116]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203230551 203240576 enh880
Skin (Keratinocyte) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Uterus Thymus
Transcript factors that have rs10800909[chr1:203240116]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203240005 203240469 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21367656
chr1 203240040 203240484 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21367657
chr1 203240103 203240124 IRF1 JASPAR yes 34612049
chr1 203240107 203240122 PRDM1 JASPAR yes 34612050
Genes associated with rs10800909[chr1:203240116], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More