EnhancerDB
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  3. rs10840458[chr11:10677854]
Enhancers that have rs10840458[chr11:10677854]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 10657898 10693746 enh13761
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs10840458[chr11:10677854]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 10677849 10677859 HOXC10 JASPAR yes 37330254
chr11 10677849 10677859 HOXD11 JASPAR yes 37330255
chr11 10677849 10677859 HOXD13 JASPAR yes 37330256
chr11 10677849 10677860 HOXA10 JASPAR yes 37330257
chr11 10677849 10677860 HOXC11 JASPAR yes 37330258
chr11 10677849 10677860 HOXC12 JASPAR yes 37330259
chr11 10677849 10677860 HOXD12 JASPAR yes 37330260
chr11 10677850 10677859 CDX1 JASPAR yes 37330261
chr11 10677850 10677861 CDX2 JASPAR yes 37330262
Genes associated with rs10840458[chr11:10677854], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More