EnhancerDB
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Enhancers that have rs10876477[chr12:54053246]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54048865 54056820 enh14743
Prostate (PC-3) Liver (HepG2) Large Intestine Lung (PC-9) Astrocyte Stomach Placenta Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs10876477[chr12:54053246]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54049783 54055288 ZNF274 GTRD no Blood (GM12878) 108036404
chr12 54051971 54055194 ZNF274 GTRD no Blood (GM12878) 108036405
chr12 54052311 54054538 ZNF274 GTRD no Blood (GM12878) 108036406
chr12 54052324 54054404 ZNF274 GTRD no Blood (GM12878) 108036407
chr12 54052384 54053750 TCF7L2 GTRD no Colon (HCT116) 108036408
chr12 54052462 54053909 ZNF274 GTRD no Blood (GM12878) 108036409
chr12 54052496 54054902 ZNF274 GTRD no Blood (GM12878) 108036410
chr12 54052506 54054261 ZNF274 GTRD no Blood (GM12878) 108036411
chr12 54052515 54054674 ZNF274 GTRD no Blood (GM12878) 108036412
chr12 54052539 54055233 ZBTB33 GTRD no Lung (A549) 108036413
chr12 54052567 54054038 ZNF274 GTRD no Blood (GM12878) 108036414
chr12 54052574 54054869 ZNF274 GTRD no Blood (GM12878) 108036415
chr12 54052579 54054254 ZNF274 GTRD no Blood (GM12878) 108036416
chr12 54052587 54054446 STAT3 GTRD no Blood (OCI-LY7) 108036417
chr12 54052594 54054322 ZBTB33 GTRD no Lung (A549) 108036418
chr12 54052596 54054219 ZBTB33 GTRD no Lung (A549) 108036420
chr12 54052596 54054428 ZNF274 GTRD no Blood (GM12878) 108036421
chr12 54052602 54053900 ZNF274 GTRD no Blood (GM12878) 108036423
chr12 54052603 54054361 ZNF274 GTRD no Blood (GM12878) 108036424
chr12 54052630 54054936 ZNF274 GTRD no Blood (GM12878) 108036425
chr12 54052638 54053713 ZNF274 GTRD no Blood (GM12878) 108036426
chr12 54052639 54053709 ZNF274 GTRD no Blood (GM12878) 108036427
chr12 54052686 54054228 ZBTB33 GTRD no Brain (SK-N-SH) 108036428
chr12 54052692 54054310 ZBTB33 GTRD no Lung (A549) 108036429
chr12 54052693 54053613 ZNF274 GTRD no Blood (GM12878) 108036430
chr12 54052708 54053252 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21549464
chr12 54052708 54053252 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108036432
chr12 54052708 54054225 ZBTB33 GTRD no Lung (A549) 108036433
chr12 54052716 54054269 ZNF274 GTRD no Blood (GM12878) 108036434
chr12 54052728 54053324 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21549465
chr12 54052728 54053324 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108036435
chr12 54052738 54054304 ZNF274 GTRD no Blood (GM12878) 108036438
chr12 54052743 54054498 ZBTB33 GTRD no Brain (SK-N-SH) 108036439
chr12 54052744 54054319 ZBTB33 GTRD no Lung (A549) 108036440
chr12 54052747 54054289 ZNF274 GTRD no Blood (GM12878) 108036441
chr12 54052748 54053364 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21549466
chr12 54052748 54053364 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108036442
chr12 54052751 54054292 ZNF274 GTRD no Blood (GM12878) 108036443
chr12 54052767 54054914 ZBTB33 GTRD no Lung (A549) 108036444
chr12 54052768 54053973 ZNF274 GTRD no Blood (GM12878) 108036445
chr12 54052775 54053755 ZNF274 GTRD no Blood (GM12878) 108036446
chr12 54052790 54054209 ZNF274 GTRD no Blood (GM12878) 108036448
chr12 54052797 54054819 ZBTB33 GTRD no Brain (SK-N-SH) 108036450
chr12 54052809 54054257 ZNF274 GTRD no Blood (GM12878) 108036455
chr12 54052823 54053366 ZNF274 GTRD no Blood (GM12878) 108036457
chr12 54052824 54054802 ZNF274 GTRD no Blood (GM12878) 108036458
chr12 54052828 54054031 ZNF274 GTRD no Blood (GM12878) 108036459
chr12 54052828 54054364 ZNF274 GTRD no Blood (GM12878) 108036460
chr12 54052841 54054043 ZNF274 GTRD no Blood (GM12878) 108036464
chr12 54052843 54054070 ZNF274 GTRD no Blood (GM12878) 108036465
chr12 54052861 54054326 ZBTB33 GTRD no Brain (SK-N-SH) 108036467
chr12 54052861 54054448 ZBTB33 GTRD no Lung (A549) 108036468
chr12 54052865 54053579 ZNF274 GTRD no Blood (GM12878) 108036469
chr12 54052866 54055027 ZBTB33 GTRD no Lung (A549) 108036470
chr12 54052881 54053907 ZBTB33 GTRD no Brain (SK-N-SH) 108036471
chr12 54052893 54053596 ZNF274 GTRD no Blood (GM12878) 108036472
chr12 54052893 54053911 ZNF274 GTRD no Blood (GM12878) 108036473
chr12 54052894 54054162 ZNF274 GTRD no Blood (GM12878) 108036474
chr12 54052906 54054920 ZBTB33 GTRD no Lung (A549) 108036476
chr12 54052908 54053288 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21549476
chr12 54052908 54053288 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108036477
chr12 54052919 54053508 ZNF274 GTRD no Blood (GM12878) 108036478
chr12 54052921 54053827 TCF7L2 GTRD no Colon (HCT116) 108036479
chr12 54052923 54054968 ZBTB33 GTRD no Brain (SK-N-SH) 108036480
chr12 54052926 54054015 ZNF274 GTRD no Blood (GM12878) 108036481
chr12 54052927 54054376 ZNF274 GTRD no Blood (GM12878) 108036482
chr12 54052930 54053366 ZNF274 GTRD no Liver (HepG2) 21549477
chr12 54052930 54053366 ZNF274 GTRD no Liver (HepG2) 108036483
chr12 54052936 54053875 ZNF274 GTRD no Blood (GM12878) 108036484
chr12 54052940 54053540 ZNF274 GTRD no Blood (GM12878) 108036485
chr12 54052972 54053429 ZNF274 GTRD no Blood (GM12878) 108036486
chr12 54052975 54054441 ZBTB33 GTRD no Lung (A549) 108036487
chr12 54052981 54054279 ZBTB33 GTRD no Lung (A549) 108036488
chr12 54052988 54053634 ZNF274 GTRD no Blood (GM12878) 108036489
chr12 54053004 54053537 ZNF274 GTRD no Blood (GM12878) 108036490
chr12 54053239 54053247 FOXO3 JASPAR yes 121000614
chr12 54053242 54053255 ZBTB18 JASPAR yes 121000615
Genes associated with rs10876477[chr12:54053246], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More