EnhancerDB
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Enhancers that have rs10876657[chr12:55327402]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 55324545 55336755 enh29581
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs10876657[chr12:55327402]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 55326953 55327429 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21550663
chr12 55326953 55327429 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108037827
chr12 55327154 55327630 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21550664
chr12 55327154 55327630 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108037829
chr12 55327245 55327609 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108037830
chr12 55327255 55327511 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108037831
chr12 55327398 55327418 ESR1 JASPAR yes 121060508
chr12 55327401 55327418 RXRA JASPAR yes 121060509
chr12 55327401 55327419 ESR2 JASPAR yes 121060510
chr12 55327402 55327419 ESR1 JASPAR yes 121060511
chr12 55327402 55327420 ESR1 JASPAR yes 121060512
chr12 55327402 55327420 ESR2 JASPAR yes 121060513
Genes associated with rs10876657[chr12:55327402], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More