EnhancerDB
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  3. rs10900496[chr1:205447088]
Enhancers that have rs10900496[chr1:205447088]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205444631 205456855 enh61954
Prostate (PC-3) Cervix (HeLa-S3) Esophagus Stomach Muscle (A673) Colon (HCT116) Breast Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs10900496[chr1:205447088]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205446688 205447344 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21371876
chr1 205446941 205447411 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21371877
chr1 205446943 205447447 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21371878
chr1 205446950 205447480 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21371879
chr1 205447005 205447195 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21371880
chr1 205447050 205447390 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21371881
chr1 205447079 205447100 ZNF263 JASPAR yes 34762825
chr1 205447083 205447094 TBX20 JASPAR yes 34762826
chr1 205447085 205447093 MGA JASPAR yes 34762827
chr1 205447085 205447093 TBX15 JASPAR yes 34762828
chr1 205447085 205447093 TBX1 JASPAR yes 34762829
chr1 205447085 205447093 TBX4 JASPAR yes 34762830
chr1 205447085 205447093 TBX5 JASPAR yes 34762831
Genes associated with rs10900496[chr1:205447088], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More